Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Gm13223-201ENSMUST00000118609 747 ntBASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Frmpd3A0A140LIW3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Gm12008-201ENSMUST00000117791 755 ntBASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Gm7774-201ENSMUST00000200064 533 ntBASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Frmpd3A0A140LIW3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Frmpd3A0A140LIW3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm10253-201ENSMUST00000194270 940 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm9385-201ENSMUST00000117563 472 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm6257-201ENSMUST00000163864 910 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm38294-201ENSMUST00000192831 381 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Frmpd3A0A140LIW3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Gm16198-201ENSMUST00000118766 670 ntBASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Mir6977-201ENSMUST00000184960 64 ntBASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Frmpd3A0A140LIW3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.09■□□□□ 0.65
Frmpd3A0A140LIW3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms