Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir5130-201ENSMUST00000175160 84 ntBASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.18□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms