Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm2399-201ENSMUST00000104944 225 ntBASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm11643-201ENSMUST00000119578 864 ntBASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm42778-201ENSMUST00000199644 553 ntBASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 AC140930.3-201ENSMUST00000222935 274 ntBASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-27A0A0G2JF28 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cdc34b-202ENSMUST00000188741 1252 ntBASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-27A0A0G2JF28 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms