Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Actl10-202ENSMUST00000226583 1501 ntBASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm29518-201ENSMUST00000190858 372 ntBASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm17808-201ENSMUST00000200859 894 ntBASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms