Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm7889-201ENSMUST00000185591 958 ntBASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm18959-201ENSMUST00000208954 655 ntBASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv19A0A0B4J1H4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv19A0A0B4J1H4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm43799-201ENSMUST00000201845 579 ntBASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.98□□□□□ -0.33
Trbv19A0A0B4J1H4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms