Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ank2-226ENSMUST00000189368 339 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm18669-201ENSMUST00000216049 778 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm7367-201ENSMUST00000057611 492 ntBASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms