Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Gm6443-201ENSMUST00000203599 874 ntBASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-43A0A0A6YXN5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm2651-201ENSMUST00000203560 838 ntBASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm10060-201ENSMUST00000212002 111 ntBASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm43514-201ENSMUST00000198852 424 ntBASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm25990-201ENSMUST00000102440 86 ntBASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm8097-201ENSMUST00000117903 829 ntBASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm13418-201ENSMUST00000119097 944 ntBASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-43A0A0A6YXN5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms