Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbc1A0A0A6YWV4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbc1A0A0A6YWV4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbc1A0A0A6YWV4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbc1A0A0A6YWV4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.84□□□□□ -0.03
Trbc1A0A0A6YWV4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms