Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav21-dv12A0A075B6C4 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav21-dv12A0A075B6C4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm10566-201ENSMUST00000086739 996 ntBASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm13559-201ENSMUST00000120476 863 ntBASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mir5130-201ENSMUST00000175160 84 ntBASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav21-dv12A0A075B6C4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms