Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm38027-201ENSMUST00000192315 235 ntBASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-5A0A075B6B9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-5A0A075B6B9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-5A0A075B6B9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6d-5A0A075B6B9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.08□□□□□ -0.31
Trav6d-5A0A075B6B9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm13186-201ENSMUST00000118031 316 ntBASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6d-5A0A075B6B9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6d-5A0A075B6B9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6d-5A0A075B6B9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms