Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-4A0A075B6B4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-4A0A075B6B4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-4A0A075B6B4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6-4A0A075B6B4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms