Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6d-7A0A075B6B0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6d-7A0A075B6B0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm27389-201ENSMUST00000183622 195 ntBASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trav6d-7A0A075B6B0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms