Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav8-1A0A075B641 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav8-1A0A075B641 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Gm13401-201ENSMUST00000117074 291 ntBASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav8-1A0A075B641 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms