Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm10013-201ENSMUST00000106074 672 ntBASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-7-dv9A0A075B639 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Gm18032-201ENSMUST00000222541 538 ntBASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-7-dv9A0A075B639 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-7-dv9A0A075B639 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm10052-201ENSMUST00000168019 960 ntBASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Gm7729-201ENSMUST00000050143 801 ntBASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-7-dv9A0A075B639 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-7-dv9A0A075B639 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms