Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Gm4974-201ENSMUST00000209974 875 ntBASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7n-4A0A075B620 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm6211-202ENSMUST00000167849 925 ntBASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm27000-201ENSMUST00000182943 842 ntBASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav7n-4A0A075B620 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav7n-4A0A075B620 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms