Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Gm6345-202ENSMUST00000180900 204 ntBASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv4A0A075B5I2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv4A0A075B5I2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv4A0A075B5I2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv4A0A075B5I2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv4A0A075B5I2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv4A0A075B5I2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms