Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-307P-201ENST00000516743 106 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MIR5680-201ENST00000577577 84 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MIR4503-201ENST00000582187 83 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-85P-201ENST00000605989 107 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AL162373.1-201ENST00000620433 407 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 UBE2L2-201ENST00000254302 429 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.401-201ENST00000383965 117 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 MIR568-201ENST00000385036 95 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AL513331.1-201ENST00000411908 397 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC008267.5-201ENST00000424928 265 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 HMGB1P9-201ENST00000429856 646 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AL357552.1-201ENST00000445254 415 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AL360271.2-201ENST00000447710 161 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 RNU7-187P-201ENST00000458985 68 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 RPL23AP67-201ENST00000465341 474 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC022493.2-201ENST00000506122 481 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 MTCO2P24-201ENST00000515611 426 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 RNA5SP384-201ENST00000516615 116 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-143P-201ENST00000516942 93 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-264P-201ENST00000517134 104 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC026333.2-201ENST00000542164 106 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 MIR3149-201ENST00000584629 83 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 ELOCP5-201ENST00000604924 333 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AL512643.1-201ENST00000635735 524 ntBASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CTDP1Q9Y5B0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CTDP1Q9Y5B0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.9□□□□□ -1.78
CTDP1Q9Y5B0 AC058791.1-201ENST00000608412 3198 ntBASIC3.9□□□□□ -1.78
CTDP1Q9Y5B0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.9□□□□□ -1.78
CTDP1Q9Y5B0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CTDP1Q9Y5B0 AC068647.1-201ENST00000489539 2265 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 RNA5SP197-201ENST00000363357 119 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 MIR548F4-201ENST00000408515 105 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AL592045.1-201ENST00000429867 352 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 GSTA11P-201ENST00000452866 669 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 RN7SL93P-201ENST00000463035 293 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC108860.1-201ENST00000484521 383 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 MTND4LP22-201ENST00000508209 276 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 SNORD116.3-201ENST00000517176 78 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC104576.1-201ENST00000524225 88 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC005899.2-201ENST00000584353 90 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC002545.1-201ENST00000592511 181 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 7SK.7-201ENST00000603504 247 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 MIR7112-201ENST00000616126 65 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 Z99571.1-201ENST00000636677 394 ntBASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.9□□□□□ -1.79
CTDP1Q9Y5B0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.149-201ENST00000363558 117 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 SNORA14A-201ENST00000364773 135 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 MIR517A-201ENST00000385001 87 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 RPS15AP6-201ENST00000420703 385 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 RPS29P2-201ENST00000479278 136 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 PHBP14-201ENST00000512887 367 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-120P-201ENST00000516077 103 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 AC004817.2-201ENST00000561794 651 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 OR1M4P-201ENST00000589199 287 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 AC107294.1-201ENST00000609524 467 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 AC073073.2-201ENST00000609827 2578 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 OR4G2P-202ENST00000641004 1759 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 AL365361.1-201ENST00000566942 3481 ntBASIC3.89□□□□□ -1.79
CTDP1Q9Y5B0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC009487.2-201ENST00000420969 6821 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 AC007496.3-201ENST00000624987 3443 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 CDC27P3-201ENST00000635418 1910 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-512P-201ENST00000364438 103 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.452-201ENST00000384202 108 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 Y_RNA.496-201ENST00000384444 101 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.88□□□□□ -1.79
CTDP1Q9Y5B0 MIR1302-3-201ENST00000408128 138 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms