Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-1317P-201ENST00000364582 104 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU6-1303P-201ENST00000364841 107 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 SNORD115-7-201ENST00000365306 82 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 Y_RNA.398-201ENST00000383952 99 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU6-842P-201ENST00000384269 107 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL17A1Q9UMD9 Y_RNA.597-201ENST00000410463 100 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL590632.1-201ENST00000424289 371 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL162388.1-201ENST00000450912 352 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 OR2AQ1P-201ENST00000451972 200 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC234775.1-201ENST00000454247 670 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RN7SL93P-201ENST00000463035 293 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RPL9P32-201ENST00000464118 620 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC093852.1-201ENST00000503587 266 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU6-1092P-201ENST00000516955 87 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RANP3-201ENST00000530970 276 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 UBL5P2-201ENST00000583788 219 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL670379.6-201ENST00000603753 252 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC008162.1-201ENST00000604718 254 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL670379.1-201ENST00000604752 252 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL670379.5-201ENST00000605253 252 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL670379.8-201ENST00000605353 252 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL670379.7-201ENST00000605823 252 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL138825.1-201ENST00000618587 192 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL17A1Q9UMD9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL17A1Q9UMD9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL672296.1-201ENST00000427780 2158 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 OSBPL9P4-201ENST00000371707 1800 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU6-637P-201ENST00000384050 107 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU1-89P-201ENST00000384592 164 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 MIR1250-201ENST00000408098 113 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 LAMTOR5P1-201ENST00000444290 270 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 RPL7P47-201ENST00000497299 556 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AC016065.2-201ENST00000514530 444 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 RNU6-27P-201ENST00000516146 107 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 DEFB108E-201ENST00000524692 240 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5□□□□□ -1.61
COL17A1Q9UMD9 MIR2682-201ENST00000580305 110 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5□□□□□ -1.61
COL17A1Q9UMD9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 MIR215-201ENST00000384858 110 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 U3.29-201ENST00000391296 212 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 HSPE1P8-201ENST00000406997 288 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 AC105272.1-201ENST00000438604 198 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 RPS4XP2-201ENST00000458402 793 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 AC104472.2-201ENST00000469035 601 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 UBL5P3-201ENST00000475112 231 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 TRBV12-1-201ENST00000479785 344 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 MIR4643-201ENST00000577473 78 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 AC011494.1-201ENST00000596454 237 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 AC012443.1-201ENST00000605605 231 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 BRDTP1-201ENST00000605735 677 ntBASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL17A1Q9UMD9 RNU6-1266P-201ENST00000362794 105 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 RNU6-61P-201ENST00000365528 109 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 SNORA24.1-201ENST00000384401 135 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 SNORA51.11-201ENST00000384442 131 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 Y_RNA.576-201ENST00000384781 102 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 RNU6-754P-201ENST00000391166 107 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 RNA5SP184-201ENST00000411071 108 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 RPL7P46-201ENST00000425129 740 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AC005094.1-201ENST00000440420 368 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AC087477.1-201ENST00000465747 340 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 RNU2-31P-201ENST00000516954 155 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AF186190.1-201ENST00000517470 480 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 OR11H5P-201ENST00000554039 926 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 MIR4435-1-201ENST00000582552 80 ntBASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.98□□□□□ -1.61
COL17A1Q9UMD9 AL159153.1-201ENST00000619688 317 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms