Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC063943.3-201ENST00000615562 356 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 SNORD81.2-201ENST00000365153 76 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 SNORA9.2-201ENST00000365361 133 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU6-510P-201ENST00000391239 108 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RPS4XP7-201ENST00000406274 780 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RPLP0P7-201ENST00000416050 667 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AL353621.1-201ENST00000418219 243 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC099548.1-201ENST00000421443 426 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 ZNF863P-201ENST00000426746 417 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RPL23AP22-201ENST00000437556 453 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU6-329P-201ENST00000459618 107 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC087884.1-201ENST00000469738 328 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MTND3P25-201ENST00000509243 135 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU1-41P-201ENST00000516161 162 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 RNU1-48P-201ENST00000516400 162 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AC243972.3-201ENST00000539655 198 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 SCOCP1-201ENST00000554676 349 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MIR5692A1-201ENST00000580523 69 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MIR4742-201ENST00000581069 85 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 FTX_3.1-201ENST00000610451 147 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 AL590808.1-201ENST00000618696 141 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.55□□□□□ -1.84
HDAC9Q9UKV0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 SNORD3E-201ENST00000362899 217 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RNU2-3P-201ENST00000410144 191 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RN7SKP32-201ENST00000410167 303 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RNU6-607P-201ENST00000411283 108 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 MTND3P8-201ENST00000412909 339 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RPL32P35-201ENST00000415214 394 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC008716.1-201ENST00000511084 513 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RAC1P5-201ENST00000512182 576 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 SNORA14.1-201ENST00000516113 141 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 RN7SKP256-201ENST00000517201 314 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC079600.2-201ENST00000550076 130 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 TRAV37-201ENST00000553906 342 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 FGF7P1-201ENST00000582820 288 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AC104985.2-201ENST00000620598 500 ntBASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
HDAC9Q9UKV0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RNU2-68P-201ENST00000410878 191 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 TOMM20P4-201ENST00000427861 435 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RPS12P18-201ENST00000442381 270 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RPL12P25-201ENST00000455592 494 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 MTND1P11-201ENST00000456661 876 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC117503.1-201ENST00000472241 394 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RNA5SP217-201ENST00000515959 91 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RNU1-86P-201ENST00000516108 154 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RNU1-107P-201ENST00000516617 154 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RNU7-30P-201ENST00000516835 62 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 SNORA25.17-201ENST00000517184 124 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC020895.1-201ENST00000595362 272 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AL117336.2-201ENST00000602435 335 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC024153.1-201ENST00000603103 365 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 AC093913.1-201ENST00000614178 329 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 RMST_4.1-201ENST00000616886 107 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 U2.21-201ENST00000637295 81 ntBASIC3.53□□□□□ -1.84
HDAC9Q9UKV0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
HDAC9Q9UKV0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.52□□□□□ -1.85
HDAC9Q9UKV0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms