Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC009902.1-201ENST00000519351 183 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC005668.1-201ENST00000571142 476 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC243960.4-201ENST00000600532 288 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC004805.2-201ENST00000605382 482 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC002044.1-201ENST00000606707 158 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC009233.1-201ENST00000616477 371 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 MIR6076-201ENST00000617521 113 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU6-254P-201ENST00000363377 107 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 SNORD113-7-201ENST00000363762 77 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU6-395P-201ENST00000365662 106 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.509-201ENST00000384506 99 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 FAT1P1-201ENST00000406588 507 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC092047.1-201ENST00000424997 240 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 MYL8P-204ENST00000431574 518 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 HMGB1P18-201ENST00000438801 619 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC104472.2-201ENST00000469035 601 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC103975.1-201ENST00000482506 483 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU1-86P-201ENST00000516108 154 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU1-107P-201ENST00000516617 154 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC093027.1-201ENST00000546698 429 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 MIR5692A1-201ENST00000580523 69 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 MIR5692C1-201ENST00000585309 91 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 AC087045.1-201ENST00000605856 382 ntBASIC2.89□□□□□ -1.95
SIX4Q9UIU6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SIX4Q9UIU6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU6-694P-201ENST00000364071 147 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU2-3P-201ENST00000410144 191 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 CYCSP33-201ENST00000414485 327 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 ATG3P1-201ENST00000419507 911 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNA5SP310-201ENST00000459084 116 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 MTND4P17-201ENST00000470444 350 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 FGF7P4-201ENST00000509595 295 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC008716.1-201ENST00000511084 513 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU6-277P-201ENST00000516272 106 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU6-1069P-201ENST00000516612 133 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 RNU6-256P-201ENST00000516747 97 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 SNORA25.17-201ENST00000517184 124 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AP000889.2-201ENST00000532684 490 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 DNAJC8P1-201ENST00000554535 372 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL670379.10-201ENST00000604330 253 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AL670379.9-201ENST00000605428 253 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC027309.3-201ENST00000623419 351 ntBASIC2.88□□□□□ -1.95
SIX4Q9UIU6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SIX4Q9UIU6 MTND5P7-201ENST00000413558 1798 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SIX4Q9UIU6 FTLP6-201ENST00000355274 422 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 SNORA51.4-201ENST00000364993 124 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 RNU6-140P-201ENST00000384566 108 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 SNORA1.3-201ENST00000384676 136 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 MIR34A-201ENST00000385130 110 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 MIR634-201ENST00000385208 97 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.87□□□□□ -1.95
SIX4Q9UIU6 AL353621.1-201ENST00000418219 243 ntBASIC2.87□□□□□ -1.95
SIX4Q9UIU6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
SIX4Q9UIU6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms