Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AMZ2P1-203ENST00000565833 850 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 VN1R91P-201ENST00000594377 169 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AL021879.1-201ENST00000611756 288 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC007792.1-201ENST00000623023 402 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KCMF1Q9P0J7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KCMF1Q9P0J7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.59□□□□□ -1.84
KCMF1Q9P0J7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 Y_RNA.152-201ENST00000363578 100 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AL359837.1-201ENST00000381357 287 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 Y_RNA.512-201ENST00000384518 102 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RNU6-1109P-201ENST00000391187 107 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 MIR888-201ENST00000401186 77 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RN7SKP156-201ENST00000410308 342 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC124916.1-201ENST00000444020 547 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 MTCO3P8-201ENST00000453691 755 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC006026.2-201ENST00000457376 180 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 CEACAMP4-201ENST00000457676 421 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RPS29P20-201ENST00000489592 171 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 VN1R107P-201ENST00000601784 209 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC024153.1-201ENST00000603103 365 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 MTND4LP5-201ENST00000605152 292 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RNU1-30P-201ENST00000606575 163 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 U2.1-201ENST00000618978 145 ntBASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
KCMF1Q9P0J7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 RNU6-784P-201ENST00000384330 106 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 MIR628-201ENST00000385229 95 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 SNORA69.1-201ENST00000390904 137 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 HMGN2P8-201ENST00000391458 268 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 SNORA57.3-201ENST00000411095 141 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 MTCO3P29-201ENST00000432119 779 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AC084357.1-201ENST00000473404 255 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 RPL30P10-201ENST00000488148 337 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AL590705.4-201ENST00000532209 134 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AC244505.7-201ENST00000599675 272 ntBASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
KCMF1Q9P0J7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 RNU6-942P-201ENST00000363002 107 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 SNORA51.11-201ENST00000384442 131 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 SAR1AP2-201ENST00000392696 594 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 HSPE1P26-201ENST00000405341 275 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 AL591419.1-201ENST00000427423 339 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 AL591043.1-201ENST00000432461 424 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 RPL23AP14-201ENST00000468281 468 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 RPS27AP10-201ENST00000496103 208 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.56□□□□□ -1.84
KCMF1Q9P0J7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms