Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AC008669.1-201ENST00000565823 2178 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-78P-201ENST00000362897 107 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-595P-201ENST00000363944 107 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RN7SKP227-201ENST00000364445 330 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-196P-201ENST00000384315 107 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-784P-201ENST00000384330 106 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-658P-201ENST00000384606 106 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AL356057.3-201ENST00000402607 340 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-101P-201ENST00000410323 104 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AL160004.2-201ENST00000432935 350 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RN7SKP210-201ENST00000459176 261 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RPL30P10-201ENST00000488148 337 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-911P-201ENST00000516523 104 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RNU6-1137P-201ENST00000517073 99 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 CBX3P8-201ENST00000532412 525 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 Z98751.3-201ENST00000604447 521 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AC005014.2-201ENST00000607795 599 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 AC068724.3-201ENST00000625906 87 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
VSX1Q9NZR4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX1Q9NZR4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RNU6-884P-201ENST00000363889 107 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 SNORA63.7-201ENST00000365579 123 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RPS4XP3-201ENST00000398541 413 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL591034.1-201ENST00000407447 340 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AP000275.1-201ENST00000411943 390 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC006989.1-201ENST00000427212 131 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL591043.1-201ENST00000432461 424 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC098831.1-201ENST00000440661 216 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC112492.4-201ENST00000456549 352 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MTCO2P24-201ENST00000515611 426 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RN7SKP21-201ENST00000516503 220 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RNU6-1046P-201ENST00000516538 107 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 RNU4-77P-201ENST00000516692 156 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR2116-201ENST00000517221 80 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 CR383656.8-201ENST00000549046 145 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AC136624.4-201ENST00000573044 370 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR5701-3-201ENST00000578890 82 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR3671-201ENST00000580455 88 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR4697-201ENST00000582977 78 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR5701-1-201ENST00000585138 82 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 MIR5701-2-201ENST00000615634 82 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL138880.2-201ENST00000616214 239 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
VSX1Q9NZR4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VSX1Q9NZR4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 MIR518D-201ENST00000385014 87 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 MIR548F4-201ENST00000408515 105 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 MTCO3P19-201ENST00000415864 321 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AC017079.2-201ENST00000416102 485 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AC096644.2-201ENST00000429278 159 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.28□□□□□ -1.88
VSX1Q9NZR4 MTCYBP9-201ENST00000431021 303 ntBASIC3.28□□□□□ -1.88
VSX1Q9NZR4 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms