Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 RPL30P12-201ENST00000474666 353 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC116562.3-201ENST00000506136 177 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC005178.1-201ENST00000508392 440 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 RNU1-86P-201ENST00000516108 154 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 RNU1-107P-201ENST00000516617 154 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC068587.5-201ENST00000528506 175 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 CLIC4P2-201ENST00000601934 717 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC012065.4-201ENST00000602445 679 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AL121992.2-201ENST00000606262 256 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AL160394.1-201ENST00000624765 724 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 RNU6-387P-201ENST00000411331 105 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AC005005.2-201ENST00000420779 380 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 Z99497.1-201ENST00000421282 135 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 MTCYBP5-201ENST00000423752 1135 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.03□□□□□ -2.08
POLE3Q9NRF9 MTATP6P16-201ENST00000434543 526 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AC104850.1-201ENST00000435940 476 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.03□□□□□ -2.08
POLE3Q9NRF9 RPL30P6-201ENST00000475925 342 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 RPL23AP49-201ENST00000492925 468 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 FABP5P5-201ENST00000515537 406 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 RNU6-1129P-201ENST00000515964 104 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 SCARNA24.1-201ENST00000516465 137 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 RNU2-46P-201ENST00000517038 113 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 OR5AL2P-201ENST00000532185 920 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AC009094.1-201ENST00000564443 426 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 BNIP3P8-201ENST00000597863 560 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.03□□□□□ -2.08
POLE3Q9NRF9 AC091304.9-201ENST00000612091 226 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
POLE3Q9NRF9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 RNU6-611P-201ENST00000384276 104 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC245102.2-201ENST00000448956 180 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 RNU7-125P-201ENST00000458760 62 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC109486.1-201ENST00000486833 374 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 Vault.3-201ENST00000516676 95 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AP001372.4-201ENST00000524889 472 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AP002770.2-201ENST00000543613 532 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC009063.1-201ENST00000563342 702 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 MIR548AB-201ENST00000584917 84 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 WISP1-OT1-201ENST00000602893 642 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AC009159.2-201ENST00000617603 606 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
POLE3Q9NRF9 FARSBP1-201ENST00000435808 1778 ntBASIC2.02□□□□□ -2.09
POLE3Q9NRF9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
POLE3Q9NRF9 MTND4P4-201ENST00000439033 1366 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNY4P34-201ENST00000364779 95 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNU6-116P-201ENST00000384042 109 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 Y_RNA.576-201ENST00000384781 102 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AL356432.1-201ENST00000405809 419 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 GSTA9P-201ENST00000406231 611 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 BTF3P7-201ENST00000407097 488 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNU2-48P-201ENST00000410694 191 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AL030996.1-201ENST00000411430 235 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 OR9R1P-201ENST00000412200 877 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.01□□□□□ -2.09
POLE3Q9NRF9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 CALM2P2-201ENST00000428512 440 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AC000111.3-201ENST00000433478 193 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.01□□□□□ -2.09
POLE3Q9NRF9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 snoU13.14-201ENST00000459372 104 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AC104806.1-201ENST00000508720 308 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNU6-965P-201ENST00000516721 96 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RNU6-685P-201ENST00000517088 95 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 RN7SKP256-201ENST00000517201 314 ntBASIC2.01□□□□□ -2.09
POLE3Q9NRF9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
POLE3Q9NRF9 DUXAP5-201ENST00000529668 529 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms