Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HMGB1P31-201ENST00000437242 427 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 TAF9P1-201ENST00000445421 515 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 TAF9P2-201ENST00000454958 515 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 RPL30P6-201ENST00000475925 342 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 MTND1P22-201ENST00000510572 951 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 FABP5P5-201ENST00000515537 406 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AP001646.1-201ENST00000527936 915 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC091135.1-201ENST00000585943 307 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 CLIC4P2-201ENST00000601934 717 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC234772.3-201ENST00000602277 528 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC012065.4-201ENST00000602445 679 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 Z82243.1-201ENST00000609432 473 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AL050303.3-201ENST00000613704 284 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC091834.1-201ENST00000614543 472 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 AC026585.1-201ENST00000619582 524 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 RMST_7.1-201ENST00000621935 268 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.35□□□□□ -2.19
SND1-IT1Q9HBX3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-78P-201ENST00000362897 107 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA80A-201ENST00000363922 136 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-371P-201ENST00000364283 108 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 SNORA20.2-201ENST00000383922 131 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU5A-2P-201ENST00000384337 116 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 MIR491-201ENST00000384877 84 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 USP9YP8-201ENST00000441913 500 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL136380.1-201ENST00000447970 162 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 EPS15P1-201ENST00000448836 336 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU1-86P-201ENST00000516108 154 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RN7SKP265-201ENST00000516448 223 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 RNU1-107P-201ENST00000516617 154 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 EEF1A1P37-201ENST00000522748 715 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 BNIP3P6-201ENST00000549284 499 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC022254.1-201ENST00000567857 235 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 BNIP3P25-201ENST00000596023 559 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL022161.1-201ENST00000604390 213 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AL160281.1-201ENST00000605307 311 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC092354.1-201ENST00000606057 376 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AC091304.9-201ENST00000612091 226 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 AP003485.2-201ENST00000623636 610 ntBASIC1.34□□□□□ -2.19
SND1-IT1Q9HBX3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 SNORA5B-201ENST00000363786 132 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RNA5SP212-201ENST00000391223 107 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 BTF3P7-201ENST00000407097 488 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 MIR1262-201ENST00000408276 93 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RNA5SP489-201ENST00000410986 109 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RNA5SP111-201ENST00000411386 101 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 CBX3P6-201ENST00000430257 527 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 UBE2D3P4-201ENST00000441973 436 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RPL23AP42-201ENST00000471152 471 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC126389.1-201ENST00000477436 290 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RPL30P1-201ENST00000488676 339 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC116562.3-201ENST00000506136 177 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 MTCO3P9-201ENST00000506989 781 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 RBBP4P6-201ENST00000508098 202 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AP003072.2-201ENST00000527756 676 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC068587.5-201ENST00000528506 175 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.33□□□□□ -2.2
SND1-IT1Q9HBX3 AC009094.1-201ENST00000564443 426 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms