Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-703P-201ENST00000516946 107 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC069113.1-201ENST00000517763 267 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 NUTF2P8-201ENST00000604593 363 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC123912.5-201ENST00000605470 343 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 RNU6-85P-201ENST00000605989 107 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC098657.3-201ENST00000620434 263 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 MTND4LP32-201ENST00000636111 270 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP29Q9HBJ7 AC022336.2-201ENST00000568966 2538 ntBASIC3.27□□□□□ -1.89
USP29Q9HBJ7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RNA5SP374-201ENST00000362939 125 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AL627311.1-201ENST00000431514 115 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC092798.1-201ENST00000458542 409 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RNU7-152P-201ENST00000458982 64 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC130509.1-201ENST00000464158 433 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC026801.1-201ENST00000497178 464 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RPL39P5-202ENST00000512505 151 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC010265.1-201ENST00000513509 211 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 SNORA31.19-201ENST00000517079 126 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC026371.1-201ENST00000551867 419 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AMZ2P1-203ENST00000565833 850 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 MIR4298-201ENST00000584380 73 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AL627309.6-201ENST00000606857 840 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 uc_338.25-201ENST00000613756 156 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.26□□□□□ -1.89
USP29Q9HBJ7 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
USP29Q9HBJ7 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 SNORD73A-201ENST00000386062 65 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RNY4P36-201ENST00000391116 96 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AL353705.1-201ENST00000433468 480 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 MTCYBP6-201ENST00000441810 138 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 Z75741.1-201ENST00000446793 314 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RNA5SP385-201ENST00000515947 110 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 RNU6-572P-201ENST00000516724 80 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 MIR3609-201ENST00000582661 80 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 ELOCP5-201ENST00000604924 333 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC126177.8-201ENST00000618339 1015 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 AC006111.3-201ENST00000622137 383 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 FAM35BP-202ENST00000497389 3337 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
USP29Q9HBJ7 MTND4P23-201ENST00000447723 1363 ntBASIC3.25□□□□□ -1.89
USP29Q9HBJ7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 RNU6-778P-201ENST00000363269 103 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 RNU6-1227P-201ENST00000383981 107 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 RNU6-214P-201ENST00000384130 107 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 Y_RNA.579-201ENST00000390939 94 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AL356057.2-201ENST00000403318 432 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AL357075.1-201ENST00000404107 726 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 RNU6-370P-201ENST00000411008 104 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC098614.2-201ENST00000426040 255 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AL645568.3-201ENST00000433683 316 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC005741.1-201ENST00000511094 432 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 MIR4513-201ENST00000581077 86 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 MIR4506-201ENST00000584693 77 ntBASIC3.24□□□□□ -1.89
USP29Q9HBJ7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.24□□□□□ -1.89
USP29Q9HBJ7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms