Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 RPL23AP58-201ENST00000440453 469 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC012308.1-201ENST00000451232 178 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL356010.1-201ENST00000456364 102 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 HMGB1P30-201ENST00000492455 606 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC009646.1-201ENST00000510455 318 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 SUB1P1-201ENST00000524415 382 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL512360.1-201ENST00000555346 234 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL121821.2-201ENST00000556081 394 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC021739.1-201ENST00000559631 174 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC068790.6-201ENST00000602558 258 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
ZNF541Q9H0D2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 MIR412-201ENST00000362142 91 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.41-201ENST00000362646 102 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 RNU6-1322P-201ENST00000364309 107 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 RNU6-517P-201ENST00000384362 110 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AL353193.1-201ENST00000421444 268 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 MTCYBP5-201ENST00000423752 1135 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 GTF2IP20-201ENST00000431663 360 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC018634.1-201ENST00000437554 401 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC098831.1-201ENST00000440661 216 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AL163973.1-201ENST00000484753 577 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC104136.1-201ENST00000512969 394 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 RNU6-581P-201ENST00000516214 105 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 RNU6-720P-201ENST00000516363 108 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 HSPE1P18-201ENST00000517602 280 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 MTCO3P13-201ENST00000577757 781 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC017083.3-201ENST00000609955 700 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 AC098679.4-201ENST00000624241 654 ntBASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
ZNF541Q9H0D2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 RNU6-898P-201ENST00000365627 104 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 MIR578-201ENST00000384828 96 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 U8.13-201ENST00000390842 128 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AL606923.1-201ENST00000406616 190 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 MIR1287-201ENST00000408492 90 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AC023141.4-201ENST00000412031 328 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AL441985.1-201ENST00000457727 251 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AC107222.1-201ENST00000510899 637 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AC112206.3-201ENST00000514578 389 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 RNU6-295P-201ENST00000516901 104 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 OR5BN1P-201ENST00000532955 829 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 BNIP3P6-201ENST00000549284 499 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 MIR5007-201ENST00000583098 95 ntBASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.78□□□□□ -1.96
ZNF541Q9H0D2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.78□□□□□ -1.97
ZNF541Q9H0D2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 RNU6-858P-201ENST00000362436 107 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 RNU6-371P-201ENST00000364283 108 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 Y_RNA.372-201ENST00000365599 102 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 MIR10A-201ENST00000385043 110 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 RNU6-1158P-201ENST00000391167 107 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 SNORA40C-201ENST00000391285 128 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 CALM2P3-201ENST00000400429 449 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AL162578.1-201ENST00000406202 378 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 Y_RNA.623-201ENST00000411128 95 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 MTCO1P21-201ENST00000416634 589 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AC000111.3-201ENST00000433478 193 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AL161651.1-201ENST00000440882 223 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 HMGN2P10-201ENST00000448085 265 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 AL118520.1-201ENST00000450770 291 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 RN7SKP210-201ENST00000459176 261 ntBASIC2.77□□□□□ -1.97
ZNF541Q9H0D2 GMFBP1-201ENST00000467831 427 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms