Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 Y_RNA.713-201ENST00000517013 96 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 IGKV2-23-201ENST00000518729 323 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC007458.1-201ENST00000542812 373 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AL512605.2-201ENST00000592972 256 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC006133.1-201ENST00000617106 264 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC010733.2-201ENST00000589496 5702 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 OTUD4P1-201ENST00000237841 3067 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FOXP3Q9BZS1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FOXP3Q9BZS1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AL391987.6-201ENST00000305671 199 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 snoU2_19.2-201ENST00000363024 80 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.237-201ENST00000364439 102 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 RNU6-338P-201ENST00000383888 105 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.555-201ENST00000384673 110 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 MIR215-201ENST00000384858 110 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 MIR670-201ENST00000390142 98 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 SNORD115-46-201ENST00000390982 71 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 SNORD58.1-201ENST00000391313 66 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 CYCSP19-201ENST00000411715 316 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC007919.1-201ENST00000429380 217 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 RPL23AP22-201ENST00000437556 453 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AL078601.1-201ENST00000444542 271 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC092798.1-201ENST00000458542 409 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC139453.3-201ENST00000493276 369 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 RNU6-377P-201ENST00000515965 102 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 SNORA67.7-201ENST00000516664 135 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 AP002826.1-201ENST00000608835 315 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 U6.92-201ENST00000636464 89 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 U4.7-201ENST00000638126 106 ntBASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXP3Q9BZS1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.358-201ENST00000365491 99 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.405-201ENST00000383979 100 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.451-201ENST00000384200 100 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RNY3P4-201ENST00000384428 101 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.524-201ENST00000384564 100 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.561-201ENST00000384694 100 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RNA5SP171-201ENST00000391071 115 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 MRPL35P1-201ENST00000404272 572 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RNU2-14P-201ENST00000411053 191 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 PIGPP3-201ENST00000425307 415 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC007560.1-201ENST00000426912 237 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 BX679664.1-201ENST00000434429 253 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AL513124.1-201ENST00000450410 614 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RPS23P5-201ENST00000495419 428 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RNU6-572P-201ENST00000516724 80 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 MIR2355-201ENST00000517199 87 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RNA5SP291-201ENST00000517222 105 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AP002770.2-201ENST00000543613 532 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RN7SL703P-201ENST00000578485 302 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC053481.4-201ENST00000583164 216 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 MIR3158-1-201ENST00000583596 81 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC010900.2-201ENST00000604508 210 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 MIR376A1-201ENST00000616574 68 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 AC090617.7-201ENST00000623952 126 ntBASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXP3Q9BZS1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 SNORD81.1-201ENST00000363064 77 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 RNY1-201ENST00000364228 113 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 RNU5E-7P-201ENST00000365290 117 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.352-201ENST00000365439 102 ntBASIC4.06□□□□□ -1.76
FOXP3Q9BZS1 Y_RNA.439-201ENST00000384119 94 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms