Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC105758.1-201ENST00000506038 399 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC091874.1-201ENST00000511402 339 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 CKS1BP7-201ENST00000522230 235 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC006157.1-201ENST00000611750 366 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC119674.1-207ENST00000641355 633 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 SNORA63C-201ENST00000364578 129 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-622P-201ENST00000384272 103 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-738P-201ENST00000384531 106 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-1160P-201ENST00000384546 104 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-748P-201ENST00000384648 107 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 Y_RNA.577-201ENST00000384794 101 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 MIR544A-201ENST00000384855 91 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AL159169.1-201ENST00000421119 127 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNA5SP246-201ENST00000458909 119 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 snoU13.22-201ENST00000459428 104 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 RNU6-327P-201ENST00000516270 127 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 MIR5701-3-201ENST00000578890 82 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 MIR5701-1-201ENST00000585138 82 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 BRDTP1-201ENST00000605735 677 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 MIR5701-2-201ENST00000615634 82 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 AC091152.2-201ENST00000591628 2569 ntBASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM55Q9BYV6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 MTND4P1-201ENST00000457501 1466 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 SNORA60-201ENST00000362396 134 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 RNU1-115P-201ENST00000365329 160 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 PTMAP5-201ENST00000393073 333 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL138885.1-201ENST00000405921 675 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL160004.2-201ENST00000432935 350 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL358232.1-201ENST00000448030 501 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 SNORA25.10-201ENST00000515926 124 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AC010653.1-201ENST00000571108 881 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AC090897.2-201ENST00000581715 130 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 MIR5684-201ENST00000585074 65 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AC060766.3-201ENST00000591442 263 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL355802.3-201ENST00000607571 545 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 AL021368.2-201ENST00000606125 5352 ntBASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM55Q9BYV6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 MIR767-201ENST00000390228 109 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 PTMAP2-201ENST00000397627 327 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 RNA5SP390-201ENST00000410191 113 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 RPL23AP95-201ENST00000426806 265 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AC004584.2-201ENST00000570407 410 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AL391813.1-201ENST00000603098 260 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AC092447.9-201ENST00000603395 144 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 AL356157.2-201ENST00000605122 111 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.91□□□□□ -1.78
TRIM55Q9BYV6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms