Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDX2Q99626 AL109913.1-201ENST00000421173 514 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 WARS2P1-201ENST00000429678 537 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 DLGAP5P1-201ENST00000430307 464 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 RPL36AP53-201ENST00000432891 316 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC007395.1-201ENST00000451333 677 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC139453.3-201ENST00000493276 369 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC060788.1-201ENST00000521318 469 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC107934.1-201ENST00000522215 217 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX2Q99626 CYCSP26-201ENST00000534107 320 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC123904.2-201ENST00000548059 300 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.8□□□□□ -2.12
CDX2Q99626 AL138976.2-201ENST00000563989 694 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 ROCK1P1-201ENST00000573767 549 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 MIR4421-201ENST00000578133 69 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC024619.4-201ENST00000580924 316 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC005261.5-201ENST00000596280 355 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AL451064.1-201ENST00000607718 471 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 AC104010.1-201ENST00000616889 150 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 MIR3974-201ENST00000637126 96 ntBASIC1.8□□□□□ -2.12
CDX2Q99626 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.8□□□□□ -2.12
CDX2Q99626 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.8□□□□□ -2.12
CDX2Q99626 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.8□□□□□ -2.12
CDX2Q99626 CDC27P3-201ENST00000635418 1910 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDX2Q99626 CKAP2P1-201ENST00000555477 2049 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 RNU6-500P-201ENST00000362349 107 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 RNU4-75P-201ENST00000364621 146 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 SNORA16B-201ENST00000364674 135 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 SMIM11P1-201ENST00000369586 178 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 MIR17-201ENST00000385012 84 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 U8.14-201ENST00000390843 143 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 SNORD115.1-201ENST00000391109 76 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 OR51A5P-201ENST00000415429 942 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC104651.1-201ENST00000427559 735 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX2Q99626 BRK1P2-201ENST00000442875 223 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC118469.1-201ENST00000442943 488 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 MTND2P4-201ENST00000445034 1004 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 AC090515.1-201ENST00000465295 476 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AL121769.1-201ENST00000469473 401 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.79□□□□□ -2.12
CDX2Q99626 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX2Q99626 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX2Q99626 RNU1-92P-201ENST00000517017 135 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 AP005902.1-201ENST00000521358 186 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDX2Q99626 ELOCP32-201ENST00000548625 324 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX2Q99626 MIR3915-201ENST00000578518 97 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AP001981.2-201ENST00000603241 418 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX2Q99626 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX2Q99626 AC024581.2-201ENST00000619986 252 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 AC007494.3-201ENST00000624660 743 ntBASIC1.79□□□□□ -2.12
CDX2Q99626 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CDX2Q99626 MTND4P27-201ENST00000450813 1354 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 Y_RNA.18-201ENST00000362461 102 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RNA5SP160-201ENST00000364866 120 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RNU6-701P-201ENST00000384059 107 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 Y_RNA.560-201ENST00000384689 102 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 MIR625-201ENST00000385047 85 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDX2Q99626 SNORA46.1-201ENST00000391069 153 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RNU2-36P-201ENST00000410361 191 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 SRIP3-201ENST00000413200 219 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 AC090960.1-201ENST00000421072 306 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RPS27AP14-201ENST00000422868 454 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.78□□□□□ -2.12
CDX2Q99626 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.78□□□□□ -2.12
CDX2Q99626 USP9YP15-201ENST00000442391 422 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.78□□□□□ -2.12
CDX2Q99626 RPL39P36-201ENST00000490784 156 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 SNORA3.4-201ENST00000515969 96 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 RNU7-193P-201ENST00000516723 65 ntBASIC1.78□□□□□ -2.12
CDX2Q99626 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms