Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 RNU6-160P-201ENST00000384591 107 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MIR515-2-201ENST00000384883 83 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MIR515-1-201ENST00000384884 83 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MTND4LP7-201ENST00000431728 294 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 BTF3P15-201ENST00000455606 336 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AC108078.1-201ENST00000508073 725 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MTCYBP40-201ENST00000509390 1135 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AP000907.2-201ENST00000530827 353 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AL353997.4-201ENST00000586196 166 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AC005786.1-201ENST00000588553 154 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 VN1R107P-201ENST00000601784 209 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 uc_338.15-201ENST00000615470 191 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AC010975.3-201ENST00000618727 978 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 AC093648.1-201ENST00000623546 606 ntBASIC0.74□□□□□ -2.29
CCDC115Q96NT0 DDX43P2-201ENST00000604753 1354 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNU6-112P-201ENST00000363599 104 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNU6-898P-201ENST00000365627 104 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNU6-481P-201ENST00000384194 107 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNU6-1065P-201ENST00000384513 106 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC069282.1-201ENST00000411911 526 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AL158050.1-201ENST00000416077 457 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC013410.2-201ENST00000422627 201 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC104651.1-201ENST00000427559 735 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 FO393414.1-201ENST00000428697 1184 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 GXYLT1P1-201ENST00000446657 490 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC093259.1-201ENST00000509755 300 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC093012.1-202ENST00000549403 582 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 CYP3A52P-201ENST00000563326 91 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 MIR3169-201ENST00000578032 83 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 DPPA3P3-201ENST00000603842 430 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AL391646.1-201ENST00000603860 190 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC112220.3-201ENST00000605502 502 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC093788.1-201ENST00000609356 927 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC009269.6-201ENST00000621778 588 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 AC120349.2-201ENST00000625002 298 ntBASIC0.73□□□□□ -2.29
CCDC115Q96NT0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC115Q96NT0 RNA5SP493-201ENST00000364115 91 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 Y_RNA.255-201ENST00000364581 97 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 RNU6-707P-201ENST00000364647 95 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 MTCO1P56-201ENST00000401674 224 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 POLR2J4-204ENST00000418424 324 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AL589872.1-201ENST00000426602 288 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 MTND4P6-201ENST00000438297 472 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC010631.1-201ENST00000474150 156 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC019176.1-201ENST00000518519 225 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC006518.2-201ENST00000542513 940 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC008015.1-201ENST00000555505 465 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC005332.6-201ENST00000613178 446 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC130454.1-201ENST00000622948 401 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 AC068700.1-201ENST00000565862 3754 ntBASIC0.72□□□□□ -2.29
CCDC115Q96NT0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CCDC115Q96NT0 RNU6-343P-201ENST00000364709 104 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 CR848007.2-201ENST00000424918 787 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AL096829.2-201ENST00000446582 742 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 RPS4XP11-201ENST00000446897 772 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 RPL7P55-201ENST00000450522 746 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 MRPL42P4-201ENST00000453267 443 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AC008837.2-201ENST00000513076 418 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 RN7SKP265-201ENST00000516448 223 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 SNORA76.2-201ENST00000517095 137 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AC008945.2-201ENST00000606056 604 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 AL020996.3-201ENST00000606617 222 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC115Q96NT0 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 MTND5P35-201ENST00000557537 1720 ntBASIC0.71□□□□□ -2.3
CCDC115Q96NT0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC100821.1-201ENST00000523153 2479 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 RNU6-743P-201ENST00000364151 106 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 RNU6-360P-201ENST00000390944 104 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms