Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK5RAP3Q96JB5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 SNORA63.1-201ENST00000362493 131 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 Y_RNA.339-201ENST00000365325 102 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 Y_RNA.509-201ENST00000384506 99 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AL031121.1-201ENST00000406553 254 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 RNU4-47P-201ENST00000410876 114 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AL096701.2-201ENST00000416920 238 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC098831.1-201ENST00000440661 216 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC125238.1-201ENST00000448842 249 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 MTND1P17-201ENST00000448961 204 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC130509.1-201ENST00000464158 433 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC026801.1-201ENST00000497178 464 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 RPS27P27-201ENST00000498779 255 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 MTND5P5-201ENST00000503764 376 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 RN7SKP24-201ENST00000515888 284 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 NACAP3-201ENST00000552100 481 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC010653.1-201ENST00000571108 881 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 MIR3944-201ENST00000581277 108 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC100830.2-201ENST00000581636 240 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 SRGNP1-201ENST00000603392 451 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 ELOCP5-201ENST00000604924 333 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 AC113139.1-201ENST00000605049 239 ntBASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDK5RAP3Q96JB5 MTND5P1-201ENST00000445440 1375 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.58-201ENST00000362807 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.67-201ENST00000362870 100 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.154-201ENST00000363624 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNY3P1-201ENST00000365085 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNY3-201ENST00000365484 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-1329P-201ENST00000365664 107 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.384-201ENST00000383909 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-72P-201ENST00000384285 79 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.490-201ENST00000384413 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 SNORD15B-201ENST00000384714 146 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RNA5SP354-201ENST00000391247 136 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AL445529.1-201ENST00000398713 389 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RPL37P10-201ENST00000412884 288 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC104332.2-201ENST00000429959 156 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 RPS3AP52-201ENST00000435639 297 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 CYCSP32-201ENST00000440548 321 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AL031274.1-201ENST00000450334 232 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC096745.1-201ENST00000509945 370 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 POLR3GP2-201ENST00000588366 668 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 MIR7112-201ENST00000616126 65 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 AC002064.3-201ENST00000623448 346 ntBASIC3.52□□□□□ -1.85
CDK5RAP3Q96JB5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-95P-201ENST00000384697 107 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 MIR518D-201ENST00000385014 87 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 MIR767-201ENST00000390228 109 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AL360182.1-201ENST00000397433 468 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 SNORD56-201ENST00000413522 71 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 BPY2DP-201ENST00000422208 265 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 UBE2V1P4-201ENST00000425374 344 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RPL23AP58-201ENST00000440453 469 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.635-201ENST00000459041 101 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RN7SL807P-201ENST00000470923 297 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RPL23AP45-201ENST00000476406 468 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 RPS27P26-201ENST00000494583 239 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AL451007.1-201ENST00000595491 289 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC024220.1-201ENST00000603675 484 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC016727.1-205ENST00000605437 569 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC064836.2-201ENST00000609491 462 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AP003122.5-201ENST00000527668 3766 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 AC008669.1-201ENST00000565823 2178 ntBASIC3.51□□□□□ -1.85
CDK5RAP3Q96JB5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms