Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-3P-201ENST00000384314 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-463P-201ENST00000384340 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-16P-201ENST00000384385 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-15P-201ENST00000384534 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-2-201ENST00000384627 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-29P-201ENST00000384637 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-9-201ENST00000384776 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-33P-201ENST00000384793 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 U3.42-201ENST00000408746 214 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AL356968.1-201ENST00000416622 474 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AL117339.3-201ENST00000418733 162 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AL159987.2-201ENST00000432754 307 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.86□□□□□ -1.79
ERCC4Q92889 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC013470.1-201ENST00000453438 462 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC008571.1-201ENST00000467232 300 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC025518.1-201ENST00000479856 347 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 SNORA70.19-201ENST00000516717 90 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC023442.1-201ENST00000531247 422 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC004805.2-201ENST00000605382 482 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AL121917.1-203ENST00000605534 577 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 RNU6-6P-201ENST00000606623 107 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 AC107294.3-201ENST00000609211 526 ntBASIC3.86□□□□□ -1.79
ERCC4Q92889 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.86□□□□□ -1.79
ERCC4Q92889 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERCC4Q92889 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
ERCC4Q92889 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC4Q92889 Y_RNA.364-201ENST00000365532 101 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 MIR200C-201ENST00000384980 68 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RNU6-1197P-201ENST00000391183 107 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RAB9AP3-201ENST00000412737 573 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AC245291.1-201ENST00000419501 328 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AC098614.2-201ENST00000426040 255 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC4Q92889 SNRPEP9-201ENST00000436794 238 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 NDUFB4P6-201ENST00000436819 366 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RAB9AP1-201ENST00000449393 573 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RNU6-1037P-201ENST00000459571 107 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RPL23AP45-201ENST00000476406 468 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 RPL30P5-201ENST00000494923 336 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC4Q92889 RNU6-703P-201ENST00000516946 107 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.85□□□□□ -1.79
ERCC4Q92889 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.85□□□□□ -1.79
ERCC4Q92889 AC006157.1-201ENST00000611750 366 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC4Q92889 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.85□□□□□ -1.79
ERCC4Q92889 AC032011.1-201ENST00000611703 1549 ntBASIC3.85□□□□□ -1.79
ERCC4Q92889 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC4Q92889 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC4Q92889 AC110774.1-201ENST00000623567 2018 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 RNA5SP383-201ENST00000362934 120 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 U8.8-201ENST00000365399 135 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 Y_RNA.428-201ENST00000384078 102 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 MIR23B-201ENST00000384832 97 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 Y_RNA.645-201ENST00000391229 102 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 RNU2-68P-201ENST00000410878 191 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC096664.2-201ENST00000411843 406 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC093578.1-201ENST00000415219 368 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC4Q92889 HIGD1AP2-201ENST00000446367 280 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.84□□□□□ -1.79
ERCC4Q92889 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.84□□□□□ -1.79
ERCC4Q92889 RPL12P25-201ENST00000455592 494 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC092798.1-201ENST00000458542 409 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC006483.1-201ENST00000487308 313 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC104619.4-201ENST00000510773 249 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 Y_RNA.661-201ENST00000516003 99 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 RNU6-1282P-201ENST00000516735 96 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 SNORD116.3-201ENST00000517176 78 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 RNA5SP380-201ENST00000517190 98 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.84□□□□□ -1.79
ERCC4Q92889 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC4Q92889 MIR4429-201ENST00000580105 73 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 AC099506.2-201ENST00000623074 221 ntBASIC3.84□□□□□ -1.79
ERCC4Q92889 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC4Q92889 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
ERCC4Q92889 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU6-1309P-201ENST00000363305 108 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU6-217P-201ENST00000384164 104 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 MIR10A-201ENST00000385043 110 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 MIR493-201ENST00000385254 89 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNU6-1106P-201ENST00000390845 107 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AL591034.1-201ENST00000407447 340 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNA5SP293-201ENST00000410527 113 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RNA5SP31-201ENST00000411144 127 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 PGBD4P6-201ENST00000421501 610 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 BX276092.3-201ENST00000424182 230 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 RPL23AP82-202ENST00000427528 469 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC006946.1-201ENST00000429106 328 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC4Q92889 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC4Q92889 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.83□□□□□ -1.8
ERCC4Q92889 AL078601.1-201ENST00000444542 271 ntBASIC3.83□□□□□ -1.8
ERCC4Q92889 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.83□□□□□ -1.8
ERCC4Q92889 CENPBD1P1-201ENST00000464061 469 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 652.2 ms