Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AL606489.2-201ENST00000433886 234 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.55□□□□□ -2
CCDC60Q8IWA6 AL360271.2-201ENST00000447710 161 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.55□□□□□ -2
CCDC60Q8IWA6 BTF3P15-201ENST00000455606 336 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AL356010.1-201ENST00000456364 102 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 SRRM1P2-201ENST00000464531 1192 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 RPS29P21-201ENST00000496272 170 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.55□□□□□ -2
CCDC60Q8IWA6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 MIR5692A1-201ENST00000580523 69 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 MIR3117-201ENST00000584034 78 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC005261.5-201ENST00000596280 355 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC068792.1-201ENST00000621354 417 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 AC005609.4-201ENST00000625071 447 ntBASIC2.55□□□□□ -2
CCDC60Q8IWA6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC60Q8IWA6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
CCDC60Q8IWA6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC60Q8IWA6 MIR412-201ENST00000362142 91 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 Y_RNA.3-201ENST00000362331 103 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 RNU6-715P-201ENST00000365204 103 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 RNU6-996P-201ENST00000365438 107 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 CALM2P3-201ENST00000400429 449 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC60Q8IWA6 RPL7P54-201ENST00000438336 674 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AL161651.1-201ENST00000440882 223 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.54□□□□□ -2
CCDC60Q8IWA6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.54□□□□□ -2
CCDC60Q8IWA6 AC105417.1-201ENST00000514691 285 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 RN7SKP219-201ENST00000516825 296 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AP001893.2-201ENST00000526949 202 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 LINC00933-203ENST00000559812 219 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AC025678.1-201ENST00000567861 338 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 MIR1273D-201ENST00000577266 86 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
CCDC60Q8IWA6 AL359880.1-201ENST00000621879 266 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC60Q8IWA6 MIR7515-201ENST00000637837 67 ntBASIC2.54□□□□□ -2
CCDC60Q8IWA6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.54□□□□□ -2
CCDC60Q8IWA6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC60Q8IWA6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC135776.4-201ENST00000624300 1904 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-552P-201ENST00000362869 119 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-1085P-201ENST00000363576 107 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-371P-201ENST00000364283 108 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU1-91P-201ENST00000364746 163 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 Y_RNA.372-201ENST00000365599 102 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 MIR10A-201ENST00000385043 110 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU2-29P-201ENST00000410423 189 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 UBE2V1P10-201ENST00000414685 269 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC016831.2-201ENST00000417179 352 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 PSPHP1-201ENST00000450062 261 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC60Q8IWA6 snoU109.2-201ENST00000459316 135 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC008716.1-201ENST00000511084 513 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-720P-201ENST00000516363 108 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-506P-201ENST00000516553 94 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 RNU6-314P-201ENST00000516574 104 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AP005435.4-201ENST00000529514 284 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AP003034.1-201ENST00000534621 422 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 BNIP3P6-201ENST00000549284 499 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC073539.2-201ENST00000597113 165 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC017083.3-201ENST00000609955 700 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 uc_338.11-201ENST00000619132 160 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 AL160394.1-201ENST00000624765 724 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.53□□□□□ -2
CCDC60Q8IWA6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
CCDC60Q8IWA6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CCDC60Q8IWA6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 MTND4P14-201ENST00000435799 1354 ntBASIC2.52□□□□□ -2.01
CCDC60Q8IWA6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms