Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 HSPE1P9-201ENST00000440046 311 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 MTATP6P23-201ENST00000440153 476 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 MIR892C-201ENST00000516410 77 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AP001596.2-201ENST00000608410 312 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC009509.4-201ENST00000619202 509 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC005832.2-201ENST00000538921 1430 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.311-201ENST00000365068 96 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RNU6-514P-201ENST00000384208 107 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RNU6-348P-201ENST00000384386 107 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RNU2-36P-201ENST00000410361 191 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RNU2-63P-201ENST00000410792 194 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RAP1BP2-201ENST00000478270 544 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 BET1P1-201ENST00000482276 359 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AC010469.2-201ENST00000496412 480 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AC068276.1-201ENST00000605793 379 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AC040896.1-201ENST00000613819 479 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 MIR8074-201ENST00000615081 81 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.452-201ENST00000384202 108 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 USP9YP26-201ENST00000421008 661 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 USP9YP18-201ENST00000425912 695 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 USP9YP24-201ENST00000434374 697 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 USP9YP17-201ENST00000444617 696 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.04□□□□□ -2.4
RIF1Q5UIP0 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AC006026.2-201ENST00000457376 180 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 RPL31P3-201ENST00000458430 332 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 snoU13.7-201ENST00000459220 104 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 MTCYBP16-201ENST00000509187 1129 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 AL391597.1-201ENST00000618707 694 ntBASIC0.04□□□□□ -2.4
RIF1Q5UIP0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
RIF1Q5UIP0 MIR377-201ENST00000362145 69 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.172-201ENST00000363765 102 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.190-201ENST00000363964 101 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.416-201ENST00000384014 113 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 MIR320B1-201ENST00000390209 79 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.03□□□□□ -2.4
RIF1Q5UIP0 RPS15AP10-201ENST00000432472 382 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 HMGN2P34-201ENST00000437647 269 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.03□□□□□ -2.4
RIF1Q5UIP0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.03□□□□□ -2.4
RIF1Q5UIP0 SNORA4.4-201ENST00000515921 135 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 RN7SKP287-201ENST00000516546 266 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 HAUS1P3-201ENST00000523909 662 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 ELOCP32-201ENST00000548625 324 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 AC105224.1-201ENST00000587055 421 ntBASIC0.03□□□□□ -2.4
RIF1Q5UIP0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.03□□□□□ -2.4
RIF1Q5UIP0 SNORD115-24-201ENST00000363528 82 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 RNU6-945P-201ENST00000383947 107 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 RNU6-968P-201ENST00000384076 107 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 RNU6-1222P-201ENST00000384615 107 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 MIR605-201ENST00000385078 83 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 SNORA16.2-201ENST00000390991 127 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 U6atac.2-201ENST00000408644 118 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 RNA5SP451-201ENST00000410588 110 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AC012435.1-202ENST00000568772 240 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AC106858.1-201ENST00000637497 429 ntBASIC0.03□□□□□ -2.41
RIF1Q5UIP0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
RIF1Q5UIP0 AL049737.1-201ENST00000413920 1403 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 RNA5SP391-201ENST00000363456 119 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 Y_RNA.180-201ENST00000363867 113 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 RNU11-3P-201ENST00000391111 133 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 MTCO2P20-201ENST00000437339 673 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 TPMTP4-201ENST00000450749 678 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AL163195.1-201ENST00000496941 348 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 PCNAP1-202ENST00000595299 752 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AC096656.1-201ENST00000623826 1364 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AL049545.1-201ENST00000401856 572 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AL365496.1-201ENST00000426885 215 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 RNU7-27P-201ENST00000459281 62 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 RNU7-23P-201ENST00000459465 62 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
RIF1Q5UIP0 MIR4324-201ENST00000584846 72 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AL355877.2-201ENST00000603670 358 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AC010738.1-201ENST00000604970 987 ntBASIC0.02□□□□□ -2.41
RIF1Q5UIP0 AC004832.4-201ENST00000608952 331 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms