Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC016700.2-201ENST00000446011 156 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 Y_RNA.683-201ENST00000516508 93 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 RNA5SP165-201ENST00000517142 115 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC087441.2-201ENST00000529141 262 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 MZT1P2-201ENST00000604387 248 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AL162274.2-201ENST00000614406 332 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 MIR8069-1-201ENST00000616627 86 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 MIR8069-2-201ENST00000621412 86 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC112198.2-201ENST00000426589 6996 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 AC009541.1-201ENST00000438279 2662 ntBASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL13A1Q5TAT6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 Z73965.1-201ENST00000623412 2297 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 Y_RNA.76-201ENST00000362931 109 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 Y_RNA.122-201ENST00000363331 96 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RNY4P28-201ENST00000365281 93 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RNA5SP240-201ENST00000365355 128 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RNU5A-5P-201ENST00000411054 116 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AC009296.1-201ENST00000443146 155 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AC010095.1-201ENST00000443543 144 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AP002884.2-201ENST00000471647 395 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 UBL5P3-201ENST00000475112 231 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RPS29P19-201ENST00000479709 171 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RPL31P13-201ENST00000484151 370 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RNU2-31P-201ENST00000516954 155 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AL162424.1-201ENST00000602325 221 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AC090132.2-201ENST00000615881 347 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AC099506.2-201ENST00000623074 221 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL13A1Q5TAT6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1159P-201ENST00000362933 107 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1020P-201ENST00000363684 107 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNU6-105P-201ENST00000363909 104 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNY1P5-201ENST00000383890 115 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNU6-968P-201ENST00000384076 107 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RNU1-139P-201ENST00000391307 165 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 COX6CP10-201ENST00000416832 224 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC006011.1-201ENST00000442758 349 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC010285.1-201ENST00000470580 392 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RPL23AP75-201ENST00000491601 451 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC139453.3-201ENST00000493276 369 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC023141.12-201ENST00000512399 199 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC005868.1-201ENST00000536421 331 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 MIR548AI-201ENST00000579940 88 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 AC010928.2-201ENST00000588017 287 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RPL23AP88-201ENST00000605759 454 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL13A1Q5TAT6 SCN1A-220ENST00000641603 12506 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 RNU6-843P-201ENST00000384454 104 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 MIR153-2-201ENST00000385225 87 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms