Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR1289-2-201ENST00000408360 111 ntBASIC1.23□□□□□ -2.21
TPM4P67936 MIR1267-201ENST00000408723 78 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RNU6-1025P-201ENST00000410629 104 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM4P67936 RPS27P16-201ENST00000425758 201 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM4P67936 AL591704.1-201ENST00000432574 275 ntBASIC1.23□□□□□ -2.21
TPM4P67936 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.23□□□□□ -2.21
TPM4P67936 EEF1E1P1-201ENST00000446998 430 ntBASIC1.23□□□□□ -2.21
TPM4P67936 ZNF886P-201ENST00000450781 723 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RNU6-953P-201ENST00000459154 107 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RPL30P6-201ENST00000475925 342 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM4P67936 RNU6-1315P-201ENST00000517187 99 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AP003122.4-201ENST00000530980 758 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AL136520.1-202ENST00000555494 763 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AC025678.1-201ENST00000567861 338 ntBASIC1.23□□□□□ -2.21
TPM4P67936 AC012414.6-201ENST00000568241 401 ntBASIC1.23□□□□□ -2.21
TPM4P67936 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM4P67936 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
TPM4P67936 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM4P67936 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
TPM4P67936 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TPM4P67936 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TPM4P67936 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
TPM4P67936 RNU6-414P-201ENST00000363705 104 ntBASIC1.22□□□□□ -2.21
TPM4P67936 SNORA62.1-201ENST00000364287 154 ntBASIC1.22□□□□□ -2.21
TPM4P67936 MIR513A1-201ENST00000385138 129 ntBASIC1.22□□□□□ -2.21
TPM4P67936 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
TPM4P67936 MIR1284-201ENST00000408337 120 ntBASIC1.22□□□□□ -2.21
TPM4P67936 AL135790.2-201ENST00000437701 267 ntBASIC1.22□□□□□ -2.21
TPM4P67936 AL606517.1-201ENST00000446914 387 ntBASIC1.22□□□□□ -2.21
TPM4P67936 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.22□□□□□ -2.21
TPM4P67936 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
TPM4P67936 snoU13.14-201ENST00000459372 104 ntBASIC1.22□□□□□ -2.21
TPM4P67936 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
TPM4P67936 YWHAEP4-201ENST00000505390 198 ntBASIC1.22□□□□□ -2.21
TPM4P67936 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.22□□□□□ -2.21
TPM4P67936 RNU6-1028P-201ENST00000517164 93 ntBASIC1.22□□□□□ -2.21
TPM4P67936 DEFB108A-201ENST00000530110 222 ntBASIC1.22□□□□□ -2.21
TPM4P67936 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
TPM4P67936 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.22□□□□□ -2.21
TPM4P67936 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.22□□□□□ -2.21
TPM4P67936 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.22□□□□□ -2.21
TPM4P67936 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
TPM4P67936 AC013412.1-201ENST00000610687 192 ntBASIC1.22□□□□□ -2.21
TPM4P67936 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TPM4P67936 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
TPM4P67936 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TPM4P67936 Y_RNA.578-201ENST00000390903 88 ntBASIC1.21□□□□□ -2.22
TPM4P67936 RNU2-23P-201ENST00000410545 195 ntBASIC1.21□□□□□ -2.22
TPM4P67936 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
TPM4P67936 USP9YP21-201ENST00000420603 432 ntBASIC1.21□□□□□ -2.22
TPM4P67936 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM4P67936 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.21□□□□□ -2.22
TPM4P67936 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
TPM4P67936 MTCO2P25-201ENST00000447065 681 ntBASIC1.21□□□□□ -2.22
TPM4P67936 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TPM4P67936 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM4P67936 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
TPM4P67936 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM4P67936 RNU6-991P-201ENST00000516168 107 ntBASIC1.21□□□□□ -2.22
TPM4P67936 MTCYBP33-201ENST00000575007 1130 ntBASIC1.21□□□□□ -2.22
TPM4P67936 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
TPM4P67936 AL354696.1-201ENST00000614652 497 ntBASIC1.21□□□□□ -2.22
TPM4P67936 MIR1248-201ENST00000629190 106 ntBASIC1.21□□□□□ -2.22
TPM4P67936 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TPM4P67936 RNU6-942P-201ENST00000363002 107 ntBASIC1.2□□□□□ -2.22
TPM4P67936 SNORA40.2-201ENST00000390847 128 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM4P67936 AC139712.2-201ENST00000424302 339 ntBASIC1.2□□□□□ -2.22
TPM4P67936 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.2□□□□□ -2.22
TPM4P67936 MTND2P4-201ENST00000445034 1004 ntBASIC1.2□□□□□ -2.22
TPM4P67936 MTCO1P27-201ENST00000448269 226 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
TPM4P67936 HMGB1P30-201ENST00000492455 606 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.2□□□□□ -2.22
TPM4P67936 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM4P67936 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.2□□□□□ -2.22
TPM4P67936 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
TPM4P67936 CR383656.8-201ENST00000549046 145 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AL157871.3-201ENST00000557231 293 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.2□□□□□ -2.22
TPM4P67936 uc_338.12-201ENST00000616344 181 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AC092140.2-201ENST00000618027 521 ntBASIC1.2□□□□□ -2.22
TPM4P67936 AC130454.1-201ENST00000622948 401 ntBASIC1.2□□□□□ -2.22
TPM4P67936 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TPM4P67936 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM4P67936 RNU6-112P-201ENST00000363599 104 ntBASIC1.19□□□□□ -2.22
TPM4P67936 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
TPM4P67936 SNORA4.3-201ENST00000365564 137 ntBASIC1.19□□□□□ -2.22
TPM4P67936 RNU6-278P-201ENST00000390945 109 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AL353752.1-201ENST00000454946 260 ntBASIC1.19□□□□□ -2.22
TPM4P67936 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM4P67936 AP001025.1-201ENST00000486139 332 ntBASIC1.19□□□□□ -2.22
TPM4P67936 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
TPM4P67936 AP003355.1-201ENST00000518956 587 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AL356057.1-201ENST00000533798 831 ntBASIC1.19□□□□□ -2.22
TPM4P67936 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.19□□□□□ -2.22
TPM4P67936 AC092325.1-201ENST00000566449 554 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms