Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 AL513475.1-201ENST00000406602 315 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 MIR1183-201ENST00000408856 89 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 Y_RNA.623-201ENST00000411128 95 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 AL096701.2-201ENST00000416920 238 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 MYL8P-204ENST00000431574 518 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 SNRPEP4-201ENST00000435815 279 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 RNU6-1037P-201ENST00000459571 107 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 AC128713.1-201ENST00000471495 306 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.91□□□□□ -1.78
HERVK_113P62684 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.91□□□□□ -1.78
HERVK_113P62684 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.91□□□□□ -1.78
HERVK_113P62684 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
HERVK_113P62684 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 EIF4BP1-201ENST00000554881 351 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.91□□□□□ -1.78
HERVK_113P62684 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 AC005592.1-201ENST00000566527 1640 ntBASIC3.91□□□□□ -1.78
HERVK_113P62684 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERVK_113P62684 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
HERVK_113P62684 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
HERVK_113P62684 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.9□□□□□ -1.78
HERVK_113P62684 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HERVK_113P62684 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
HERVK_113P62684 Y_RNA.80-201ENST00000362996 102 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 SNORD14B-201ENST00000364533 90 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 Y_RNA.389-201ENST00000383924 113 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 Y_RNA.485-201ENST00000384395 102 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 HSPE1P26-201ENST00000405341 275 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC099799.1-201ENST00000439809 192 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AC011816.1-201ENST00000441346 546 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AC009237.8-201ENST00000445492 379 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 FO393415.2-201ENST00000480085 343 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC105758.1-201ENST00000506038 399 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERVK_113P62684 SNORA31.19-201ENST00000517079 126 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC011602.1-201ENST00000546484 331 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.9□□□□□ -1.79
HERVK_113P62684 MIR3690-201ENST00000580266 75 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 MIR4503-201ENST00000582187 83 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 MIR4298-201ENST00000584380 73 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AL162274.2-201ENST00000614406 332 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AC048347.1-201ENST00000624621 427 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 AC116096.1-201ENST00000566804 2314 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HERVK_113P62684 AC058791.1-201ENST00000608412 3198 ntBASIC3.9□□□□□ -1.79
HERVK_113P62684 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
HERVK_113P62684 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
HERVK_113P62684 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
HERVK_113P62684 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HERVK_113P62684 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.89□□□□□ -1.79
HERVK_113P62684 RPL9P7-201ENST00000330965 580 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 MIR30E-201ENST00000362104 92 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RNU6-1317P-201ENST00000364582 104 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RNU1-115P-201ENST00000365329 160 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RNU6-827P-201ENST00000365553 106 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 Y_RNA.455-201ENST00000384230 98 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 MIR568-201ENST00000385036 95 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 MIR325-201ENST00000385260 98 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HERVK_113P62684 RNU2-68P-201ENST00000410878 191 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.89□□□□□ -1.79
HERVK_113P62684 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.89□□□□□ -1.79
HERVK_113P62684 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 MTCYBP9-201ENST00000431021 303 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RPS15AP10-201ENST00000432472 382 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 AL513043.1-201ENST00000439124 535 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RPL9P9-202ENST00000466501 579 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RPL27AP5-201ENST00000469428 449 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 HMGN2P13-201ENST00000476476 274 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.89□□□□□ -1.79
HERVK_113P62684 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.89□□□□□ -1.79
HERVK_113P62684 RNA5SP341-201ENST00000516261 117 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 RNU6-572P-201ENST00000516724 80 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 CBX3P8-201ENST00000532412 525 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 GNAI2P1-201ENST00000541815 315 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.89□□□□□ -1.79
HERVK_113P62684 AL162713.1-201ENST00000604480 262 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 AC004805.2-201ENST00000605382 482 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 AC022149.2-201ENST00000621061 203 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HERVK_113P62684 AC068647.1-201ENST00000489539 2265 ntBASIC3.89□□□□□ -1.79
HERVK_113P62684 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HERVK_113P62684 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
HERVK_113P62684 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERVK_113P62684 AC091812.1-201ENST00000432235 1948 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC007785.2-201ENST00000598627 1916 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.88□□□□□ -1.79
HERVK_113P62684 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HERVK_113P62684 Y_RNA.39-201ENST00000362620 98 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 Y_RNA.149-201ENST00000363558 117 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 MIR521-1-201ENST00000384902 87 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 MIR493-201ENST00000385254 89 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms