Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MTCO3P40-201ENST00000392516 676 ntBASIC2.4□□□□□ -2.03
PEX3P56589 RNU2-49P-201ENST00000410666 184 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.4□□□□□ -2.03
PEX3P56589 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PEX3P56589 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.4□□□□□ -2.03
PEX3P56589 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.4□□□□□ -2.03
PEX3P56589 AL078601.1-201ENST00000444542 271 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC073415.1-201ENST00000449240 153 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.4□□□□□ -2.03
PEX3P56589 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PEX3P56589 TRBV1-201ENST00000476502 284 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC113155.1-201ENST00000511141 769 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC105417.1-201ENST00000514691 285 ntBASIC2.4□□□□□ -2.03
PEX3P56589 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.4□□□□□ -2.03
PEX3P56589 AC104383.1-201ENST00000530297 370 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.4□□□□□ -2.03
PEX3P56589 AC006199.1-201ENST00000548728 219 ntBASIC2.4□□□□□ -2.03
PEX3P56589 NACAP3-201ENST00000552100 481 ntBASIC2.4□□□□□ -2.03
PEX3P56589 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.4□□□□□ -2.03
PEX3P56589 LRRC37A5P-203ENST00000580181 585 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC073539.2-201ENST00000597113 165 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC013562.2-201ENST00000611632 603 ntBASIC2.4□□□□□ -2.03
PEX3P56589 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
PEX3P56589 RMST_4.1-201ENST00000616886 107 ntBASIC2.4□□□□□ -2.03
PEX3P56589 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.4□□□□□ -2.03
PEX3P56589 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PEX3P56589 MIR6863-201ENST00000636112 90 ntBASIC2.4□□□□□ -2.03
PEX3P56589 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PEX3P56589 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PEX3P56589 Y_RNA.3-201ENST00000362331 103 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU6-552P-201ENST00000362869 119 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU1-105P-201ENST00000363470 161 ntBASIC2.39□□□□□ -2.03
PEX3P56589 MIR627-201ENST00000384979 97 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU6-903P-201ENST00000391270 109 ntBASIC2.39□□□□□ -2.03
PEX3P56589 SNORA11.2-201ENST00000408318 127 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
PEX3P56589 SNORA11.4-201ENST00000408823 129 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU2-3P-201ENST00000410144 191 ntBASIC2.39□□□□□ -2.03
PEX3P56589 RNU4-46P-201ENST00000410818 138 ntBASIC2.39□□□□□ -2.03
PEX3P56589 MTND1P23-201ENST00000416931 372 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL353621.1-201ENST00000418219 243 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.39□□□□□ -2.03
PEX3P56589 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 DPH3P2-201ENST00000422618 250 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PEX3P56589 MTCO3P30-201ENST00000426425 670 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.39□□□□□ -2.03
PEX3P56589 MTND3P21-201ENST00000433774 331 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.39□□□□□ -2.03
PEX3P56589 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PEX3P56589 AC016691.1-201ENST00000441321 413 ntBASIC2.39□□□□□ -2.03
PEX3P56589 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AC083798.1-201ENST00000472671 131 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 FAM92A1P2-202ENST00000504766 877 ntBASIC2.39□□□□□ -2.03
PEX3P56589 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.39□□□□□ -2.03
PEX3P56589 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
PEX3P56589 MTCO3P23-201ENST00000561363 289 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AC004223.2-201ENST00000590309 544 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AL138889.2-201ENST00000603883 242 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AC008945.2-201ENST00000606056 604 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 AL158209.2-201ENST00000619266 216 ntBASIC2.39□□□□□ -2.03
PEX3P56589 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.39□□□□□ -2.03
PEX3P56589 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
PEX3P56589 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PEX3P56589 AL354685.2-201ENST00000448218 1447 ntBASIC2.39□□□□□ -2.03
PEX3P56589 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PEX3P56589 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.38□□□□□ -2.03
PEX3P56589 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PEX3P56589 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 MIR412-201ENST00000362142 91 ntBASIC2.38□□□□□ -2.03
PEX3P56589 U8.2-201ENST00000363156 134 ntBASIC2.38□□□□□ -2.03
PEX3P56589 Y_RNA.381-201ENST00000365666 102 ntBASIC2.38□□□□□ -2.03
PEX3P56589 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 RNU6-1127P-201ENST00000384580 107 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RNU6-780P-201ENST00000391030 104 ntBASIC2.38□□□□□ -2.03
PEX3P56589 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PEX3P56589 AL513475.1-201ENST00000406602 315 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RNU2-29P-201ENST00000410423 189 ntBASIC2.38□□□□□ -2.03
PEX3P56589 Y_RNA.623-201ENST00000411128 95 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC096649.2-201ENST00000416186 393 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.38□□□□□ -2.03
PEX3P56589 AL606489.2-201ENST00000433886 234 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC096638.1-201ENST00000444678 216 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AL583843.1-201ENST00000456070 346 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RN7SL429P-201ENST00000479090 223 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.38□□□□□ -2.03
PEX3P56589 RN7SL489P-201ENST00000486185 223 ntBASIC2.38□□□□□ -2.03
PEX3P56589 MRPL42P6-201ENST00000486397 371 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RN7SL327P-201ENST00000488659 223 ntBASIC2.38□□□□□ -2.03
PEX3P56589 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.38□□□□□ -2.03
PEX3P56589 RNU1-86P-201ENST00000516108 154 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RNU1-107P-201ENST00000516617 154 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms