Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.98□□□□□ -1.93
SOX2P48431 AC078795.3-201ENST00000602913 472 ntBASIC2.98□□□□□ -1.93
SOX2P48431 AC024153.1-201ENST00000603103 365 ntBASIC2.98□□□□□ -1.93
SOX2P48431 MIR3976-201ENST00000606807 139 ntBASIC2.98□□□□□ -1.93
SOX2P48431 uc_338.22-201ENST00000622722 187 ntBASIC2.98□□□□□ -1.93
SOX2P48431 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX2P48431 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SOX2P48431 AC110491.1-201ENST00000562191 2010 ntBASIC2.98□□□□□ -1.93
SOX2P48431 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.97□□□□□ -1.93
SOX2P48431 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX2P48431 ADAM3A-203ENST00000461344 2157 ntBASIC2.97□□□□□ -1.93
SOX2P48431 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX2P48431 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SOX2P48431 SNORD56.3-201ENST00000363507 71 ntBASIC2.97□□□□□ -1.93
SOX2P48431 MIR521-1-201ENST00000384902 87 ntBASIC2.97□□□□□ -1.93
SOX2P48431 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SOX2P48431 RAB9AP3-201ENST00000412737 573 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX2P48431 BPY2DP-201ENST00000422208 265 ntBASIC2.97□□□□□ -1.93
SOX2P48431 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX2P48431 AC124916.1-201ENST00000444020 547 ntBASIC2.97□□□□□ -1.93
SOX2P48431 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.97□□□□□ -1.93
SOX2P48431 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.97□□□□□ -1.93
SOX2P48431 AC125238.1-201ENST00000448842 249 ntBASIC2.97□□□□□ -1.93
SOX2P48431 RAB9AP1-201ENST00000449393 573 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AC010099.1-201ENST00000455434 375 ntBASIC2.97□□□□□ -1.93
SOX2P48431 RN7SL385P-201ENST00000468873 276 ntBASIC2.97□□□□□ -1.93
SOX2P48431 HMGN2P13-201ENST00000476476 274 ntBASIC2.97□□□□□ -1.93
SOX2P48431 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX2P48431 RN7SL132P-201ENST00000478131 296 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AL163540.1-201ENST00000485382 386 ntBASIC2.97□□□□□ -1.93
SOX2P48431 RPL23AP49-201ENST00000492925 468 ntBASIC2.97□□□□□ -1.93
SOX2P48431 RNA5SP384-201ENST00000516615 116 ntBASIC2.97□□□□□ -1.93
SOX2P48431 Y_RNA.711-201ENST00000516993 102 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AC104027.1-201ENST00000521887 300 ntBASIC2.97□□□□□ -1.93
SOX2P48431 OR8R1P-201ENST00000543943 764 ntBASIC2.97□□□□□ -1.93
SOX2P48431 MIR4273-201ENST00000582824 84 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AC020895.1-201ENST00000595362 272 ntBASIC2.97□□□□□ -1.93
SOX2P48431 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
SOX2P48431 SRGNP1-201ENST00000603392 451 ntBASIC2.97□□□□□ -1.93
SOX2P48431 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
SOX2P48431 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX2P48431 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SOX2P48431 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.96□□□□□ -1.94
SOX2P48431 AC017071.1-201ENST00000564407 2204 ntBASIC2.96□□□□□ -1.94
SOX2P48431 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.96□□□□□ -1.94
SOX2P48431 CDC27P3-201ENST00000635418 1910 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-1115P-201ENST00000362490 106 ntBASIC2.96□□□□□ -1.94
SOX2P48431 Y_RNA.112-201ENST00000363250 102 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNA5SP197-201ENST00000363357 119 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-527P-201ENST00000363425 104 ntBASIC2.96□□□□□ -1.94
SOX2P48431 Y_RNA.162-201ENST00000363683 102 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-336P-201ENST00000364891 107 ntBASIC2.96□□□□□ -1.94
SOX2P48431 SNORA73.2-201ENST00000364946 201 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-1280P-201ENST00000365211 107 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU1-100P-201ENST00000365255 165 ntBASIC2.96□□□□□ -1.94
SOX2P48431 U8.8-201ENST00000365399 135 ntBASIC2.96□□□□□ -1.94
SOX2P48431 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX2P48431 U8.11-201ENST00000384699 133 ntBASIC2.96□□□□□ -1.94
SOX2P48431 U8.12-201ENST00000384701 133 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU1-101P-201ENST00000391171 127 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RPS29P13-201ENST00000402041 169 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-174P-201ENST00000410406 106 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNA5SP44-201ENST00000410446 133 ntBASIC2.96□□□□□ -1.94
SOX2P48431 ATP5A1P2-201ENST00000412323 255 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX2P48431 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.96□□□□□ -1.94
SOX2P48431 CYCSP32-201ENST00000440548 321 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AL137792.2-201ENST00000443484 235 ntBASIC2.96□□□□□ -1.94
SOX2P48431 HMGN2P10-201ENST00000448085 265 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.96□□□□□ -1.94
SOX2P48431 U8.18-201ENST00000459285 133 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-470P-201ENST00000515954 104 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-612P-201ENST00000516909 102 ntBASIC2.96□□□□□ -1.94
SOX2P48431 RNU6-264P-201ENST00000517134 104 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AC022634.1-201ENST00000520765 532 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AP005902.1-201ENST00000521358 186 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.96□□□□□ -1.94
SOX2P48431 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.96□□□□□ -1.94
SOX2P48431 AC007224.1-201ENST00000564410 144 ntBASIC2.96□□□□□ -1.94
SOX2P48431 HMGN2P15-201ENST00000585707 270 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AC005034.5-201ENST00000604219 466 ntBASIC2.96□□□□□ -1.94
SOX2P48431 AC005046.1-201ENST00000608515 625 ntBASIC2.96□□□□□ -1.94
SOX2P48431 PART1_1.1-201ENST00000611761 217 ntBASIC2.96□□□□□ -1.94
SOX2P48431 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.96□□□□□ -1.94
SOX2P48431 MFSD8-233ENST00000641482 4860 ntBASIC2.96□□□□□ -1.94
SOX2P48431 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX2P48431 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SOX2P48431 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX2P48431 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SOX2P48431 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
SOX2P48431 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX2P48431 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-490P-201ENST00000362985 107 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-942P-201ENST00000363002 107 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNU6-105P-201ENST00000363909 104 ntBASIC2.95□□□□□ -1.94
SOX2P48431 Y_RNA.216-201ENST00000364205 93 ntBASIC2.95□□□□□ -1.94
SOX2P48431 RNA5SP515-201ENST00000364570 118 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms