Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1□□□□□ -2.25
RPL28P46779 PTENP1-201ENST00000447117 1215 ntBASIC1□□□□□ -2.25
RPL28P46779 FDX1P2-201ENST00000450769 375 ntBASIC1□□□□□ -2.25
RPL28P46779 AC012308.1-201ENST00000451232 178 ntBASIC1□□□□□ -2.25
RPL28P46779 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 AC112492.4-201ENST00000456549 352 ntBASIC1□□□□□ -2.25
RPL28P46779 AC093899.1-201ENST00000457984 376 ntBASIC1□□□□□ -2.25
RPL28P46779 YWHAEP4-201ENST00000505390 198 ntBASIC1□□□□□ -2.25
RPL28P46779 RNU6-1092P-201ENST00000516955 87 ntBASIC1□□□□□ -2.25
RPL28P46779 RNU6-467P-201ENST00000517027 110 ntBASIC1□□□□□ -2.25
RPL28P46779 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPL28P46779 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1□□□□□ -2.25
RPL28P46779 AP004247.1-201ENST00000531556 1289 ntBASIC1□□□□□ -2.25
RPL28P46779 AC027807.1-201ENST00000559921 996 ntBASIC1□□□□□ -2.25
RPL28P46779 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1□□□□□ -2.25
RPL28P46779 MTND3P19-201ENST00000603825 345 ntBASIC1□□□□□ -2.25
RPL28P46779 BX248123.2-201ENST00000606318 124 ntBASIC1□□□□□ -2.25
RPL28P46779 AC091965.4-201ENST00000607691 587 ntBASIC1□□□□□ -2.25
RPL28P46779 uc_338.12-201ENST00000616344 181 ntBASIC1□□□□□ -2.25
RPL28P46779 FRG1KP-201ENST00000623592 341 ntBASIC1□□□□□ -2.25
RPL28P46779 AL356596.1-201ENST00000624230 379 ntBASIC1□□□□□ -2.25
RPL28P46779 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RPL28P46779 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPL28P46779 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPL28P46779 MIR517C-201ENST00000385103 95 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL627390.1-201ENST00000396055 340 ntBASIC0.99□□□□□ -2.25
RPL28P46779 MIR1304-201ENST00000408243 91 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RNU2-62P-201ENST00000410868 191 ntBASIC0.99□□□□□ -2.25
RPL28P46779 PIGPP2-201ENST00000411569 458 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RPS3AP37-201ENST00000419176 745 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL354941.1-201ENST00000438600 464 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL28P46779 EEF1A1P39-201ENST00000440791 250 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.99□□□□□ -2.25
RPL28P46779 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.99□□□□□ -2.25
RPL28P46779 AL353752.1-201ENST00000454946 260 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RPL30P6-201ENST00000475925 342 ntBASIC0.99□□□□□ -2.25
RPL28P46779 MTCYBP40-201ENST00000509390 1135 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AC093259.1-201ENST00000509755 300 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RNVU1-2-201ENST00000516326 135 ntBASIC0.99□□□□□ -2.25
RPL28P46779 RNU6-965P-201ENST00000516721 96 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.99□□□□□ -2.25
RPL28P46779 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL28P46779 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.99□□□□□ -2.25
RPL28P46779 AK6P1-201ENST00000540219 478 ntBASIC0.99□□□□□ -2.25
RPL28P46779 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
RPL28P46779 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL28P46779 AL160236.1-201ENST00000556317 195 ntBASIC0.99□□□□□ -2.25
RPL28P46779 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL28P46779 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL28P46779 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.99□□□□□ -2.25
RPL28P46779 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.99□□□□□ -2.25
RPL28P46779 MIR4255-201ENST00000579351 72 ntBASIC0.99□□□□□ -2.25
RPL28P46779 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.99□□□□□ -2.25
RPL28P46779 MIR3146-201ENST00000580367 79 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL670379.2-201ENST00000604983 252 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL670379.4-201ENST00000605279 254 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL391813.2-201ENST00000609113 322 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AL138955.1-201ENST00000622881 1040 ntBASIC0.99□□□□□ -2.25
RPL28P46779 AC092104.1-201ENST00000497346 1441 ntBASIC0.98□□□□□ -2.25
RPL28P46779 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPL28P46779 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RPL28P46779 MIR412-201ENST00000362142 91 ntBASIC0.98□□□□□ -2.25
RPL28P46779 SNORA4.1-201ENST00000364263 144 ntBASIC0.98□□□□□ -2.25
RPL28P46779 RNU6-946P-201ENST00000383878 107 ntBASIC0.98□□□□□ -2.25
RPL28P46779 RNU6-439P-201ENST00000384188 106 ntBASIC0.98□□□□□ -2.25
RPL28P46779 MIR1261-201ENST00000408659 82 ntBASIC0.98□□□□□ -2.25
RPL28P46779 RNA5SP390-201ENST00000410191 113 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC019070.1-201ENST00000415008 1024 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.98□□□□□ -2.25
RPL28P46779 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 AL627311.1-201ENST00000431514 115 ntBASIC0.98□□□□□ -2.25
RPL28P46779 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.98□□□□□ -2.25
RPL28P46779 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.98□□□□□ -2.25
RPL28P46779 AL121890.1-201ENST00000435457 205 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 HMGB1P18-201ENST00000438801 619 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.98□□□□□ -2.25
RPL28P46779 AC007677.1-201ENST00000445757 515 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AL035666.1-201ENST00000446195 348 ntBASIC0.98□□□□□ -2.25
RPL28P46779 NDUFB1P2-201ENST00000449477 176 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC005908.1-201ENST00000468701 347 ntBASIC0.98□□□□□ -2.25
RPL28P46779 MTCYBP35-201ENST00000503630 1137 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC119751.4-201ENST00000507498 357 ntBASIC0.98□□□□□ -2.25
RPL28P46779 TPT1P8-201ENST00000510120 555 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.98□□□□□ -2.25
RPL28P46779 AC013828.2-201ENST00000532487 235 ntBASIC0.98□□□□□ -2.25
RPL28P46779 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.98□□□□□ -2.25
RPL28P46779 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.98□□□□□ -2.25
RPL28P46779 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.98□□□□□ -2.25
RPL28P46779 AP000860.1-201ENST00000605250 559 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AL592221.1-201ENST00000605266 382 ntBASIC0.98□□□□□ -2.25
RPL28P46779 AC108747.1-201ENST00000609508 535 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms