Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC023824.2-201ENST00000566185 400 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 MIR4524B-201ENST00000581569 115 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.36□□□□□ -2.03
TNFRSF4P43489 AC008521.1-201ENST00000587471 187 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 AC023043.3-201ENST00000593113 385 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 AL670379.4-201ENST00000605279 254 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 MIR6873-201ENST00000622788 63 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 AC093648.1-201ENST00000623546 606 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFRSF4P43489 MIR6863-201ENST00000636112 90 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 U6.114-201ENST00000636407 96 ntBASIC2.36□□□□□ -2.03
TNFRSF4P43489 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.36□□□□□ -2.03
TNFRSF4P43489 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TNFRSF4P43489 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TNFRSF4P43489 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC093536.2-201ENST00000565257 1406 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFRSF4P43489 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFRSF4P43489 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 RNU6-74P-201ENST00000384235 107 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 MTATP6P18-201ENST00000417994 673 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 CALM2P2-201ENST00000428512 440 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 RPL30P4-201ENST00000429309 333 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AL627311.1-201ENST00000431514 115 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 RPS15AP9-201ENST00000439856 381 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 MTND1P1-201ENST00000445453 368 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 RNU7-26P-201ENST00000458980 63 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC006512.1-201ENST00000468816 291 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 RPL9P6-201ENST00000492764 598 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC008716.1-201ENST00000511084 513 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC112206.3-201ENST00000514578 389 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFRSF4P43489 AP003072.2-201ENST00000527756 676 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC092325.1-201ENST00000566449 554 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC025449.1-201ENST00000603896 529 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC073534.2-201ENST00000620377 381 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 AC099654.12-201ENST00000639868 649 ntBASIC2.35□□□□□ -2.03
TNFRSF4P43489 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFRSF4P43489 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.35□□□□□ -2.03
TNFRSF4P43489 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF4P43489 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF4P43489 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF4P43489 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF4P43489 Y_RNA.3-201ENST00000362331 103 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 RNU6-1179P-201ENST00000384667 107 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 RNU4-26P-201ENST00000410270 107 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 MTCO1P21-201ENST00000416634 589 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFRSF4P43489 RPS29P15-201ENST00000458329 171 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AC080013.2-201ENST00000460866 323 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 RPL9P33-201ENST00000484311 566 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 RPL36AP48-201ENST00000485521 314 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 RNU6-720P-201ENST00000516363 108 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 OR5AQ1P-201ENST00000527596 927 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AC105245.1-201ENST00000581934 244 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AL391646.1-201ENST00000603860 190 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AL138889.2-201ENST00000603883 242 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AL670379.10-201ENST00000604330 253 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AL670379.9-201ENST00000605428 253 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AC011890.2-201ENST00000613393 294 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 AL359740.1-201ENST00000624340 592 ntBASIC2.34□□□□□ -2.03
TNFRSF4P43489 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFRSF4P43489 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TNFRSF4P43489 MTND5P17-201ENST00000418405 1603 ntBASIC2.34□□□□□ -2.04
TNFRSF4P43489 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC138393.1-203ENST00000327086 343 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-858P-201ENST00000362436 107 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 SNORD3E-201ENST00000362899 217 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 Y_RNA.159-201ENST00000363674 87 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 SNORA38-201ENST00000363946 132 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 Y_RNA.409-201ENST00000383990 98 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-1215P-201ENST00000384441 102 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 MIR454-201ENST00000390180 115 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC068050.1-201ENST00000394891 380 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 U6atac.2-201ENST00000408644 118 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC016831.2-201ENST00000417179 352 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFRSF4P43489 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFRSF4P43489 MTCO2P19-201ENST00000427513 598 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 NDUFB1P2-201ENST00000449477 176 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU7-182P-201ENST00000459009 62 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.33□□□□□ -2.04
TNFRSF4P43489 AC098799.2-201ENST00000509466 868 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-314P-201ENST00000516574 104 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNA5SP503-201ENST00000517047 117 ntBASIC2.33□□□□□ -2.04
TNFRSF4P43489 RNU6-685P-201ENST00000517088 95 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms