Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 OR11H5P-201ENST00000554039 926 ntBASIC2.47□□□□□ -2.01
SOX3P41225 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
SOX3P41225 AP000907.4-201ENST00000604143 237 ntBASIC2.47□□□□□ -2.01
SOX3P41225 AC087045.1-201ENST00000605856 382 ntBASIC2.47□□□□□ -2.01
SOX3P41225 AC104458.1-201ENST00000608243 463 ntBASIC2.47□□□□□ -2.01
SOX3P41225 MIR3199-2-201ENST00000636243 86 ntBASIC2.47□□□□□ -2.01
SOX3P41225 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.47□□□□□ -2.01
SOX3P41225 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.47□□□□□ -2.01
SOX3P41225 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.47□□□□□ -2.01
SOX3P41225 OR4G1P-203ENST00000641984 1631 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC093536.2-201ENST00000565257 1406 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC004520.1-201ENST00000608362 1413 ntBASIC2.46□□□□□ -2.02
SOX3P41225 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SOX3P41225 RNU6-877P-201ENST00000383868 107 ntBASIC2.46□□□□□ -2.02
SOX3P41225 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.46□□□□□ -2.02
SOX3P41225 RPL19P1-201ENST00000411635 428 ntBASIC2.46□□□□□ -2.02
SOX3P41225 OR9R1P-201ENST00000412200 877 ntBASIC2.46□□□□□ -2.02
SOX3P41225 BX682237.1-201ENST00000415016 335 ntBASIC2.46□□□□□ -2.02
SOX3P41225 ATG3P1-201ENST00000419507 911 ntBASIC2.46□□□□□ -2.02
SOX3P41225 SRIP2-201ENST00000428470 166 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.46□□□□□ -2.02
SOX3P41225 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.46□□□□□ -2.02
SOX3P41225 CALM1P1-201ENST00000442082 433 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.46□□□□□ -2.02
SOX3P41225 RNU7-167P-201ENST00000459160 62 ntBASIC2.46□□□□□ -2.02
SOX3P41225 RPS29P12-201ENST00000460178 152 ntBASIC2.46□□□□□ -2.02
SOX3P41225 RPL21P99-201ENST00000480369 423 ntBASIC2.46□□□□□ -2.02
SOX3P41225 RPS27P26-201ENST00000494583 239 ntBASIC2.46□□□□□ -2.02
SOX3P41225 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SOX3P41225 AF213884.2-201ENST00000510417 903 ntBASIC2.46□□□□□ -2.02
SOX3P41225 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.46□□□□□ -2.02
SOX3P41225 CENPUP1-201ENST00000526649 1202 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.46□□□□□ -2.02
SOX3P41225 AC092325.1-201ENST00000566449 554 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC025281.1-201ENST00000567026 265 ntBASIC2.46□□□□□ -2.02
SOX3P41225 SNORA59B-202ENST00000578183 701 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.46□□□□□ -2.02
SOX3P41225 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
SOX3P41225 MIR3941-201ENST00000582572 103 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC010525.2-201ENST00000590920 195 ntBASIC2.46□□□□□ -2.02
SOX3P41225 RNU6-89P-201ENST00000606519 100 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC068944.2-201ENST00000610373 403 ntBASIC2.46□□□□□ -2.02
SOX3P41225 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AL031601.2-202ENST00000622650 282 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AC110079.1-202ENST00000635213 138 ntBASIC2.46□□□□□ -2.02
SOX3P41225 AL136360.1-201ENST00000503377 1900 ntBASIC2.46□□□□□ -2.02
SOX3P41225 CDC27P3-201ENST00000635418 1910 ntBASIC2.45□□□□□ -2.02
SOX3P41225 RNA5SP139-201ENST00000364340 117 ntBASIC2.45□□□□□ -2.02
SOX3P41225 Y_RNA.231-201ENST00000364358 102 ntBASIC2.45□□□□□ -2.02
SOX3P41225 Y_RNA.248-201ENST00000364501 109 ntBASIC2.45□□□□□ -2.02
SOX3P41225 Y_RNA.480-201ENST00000384364 102 ntBASIC2.45□□□□□ -2.02
SOX3P41225 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SOX3P41225 RPS4XP7-201ENST00000406274 780 ntBASIC2.45□□□□□ -2.02
SOX3P41225 ARL5AP1-201ENST00000418991 388 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AC009414.1-201ENST00000427200 443 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.45□□□□□ -2.02
SOX3P41225 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.45□□□□□ -2.02
SOX3P41225 AL121601.2-201ENST00000438019 707 ntBASIC2.45□□□□□ -2.02
SOX3P41225 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AC079140.5-201ENST00000507882 310 ntBASIC2.45□□□□□ -2.02
SOX3P41225 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.45□□□□□ -2.02
SOX3P41225 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
SOX3P41225 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.45□□□□□ -2.02
SOX3P41225 AC006199.1-201ENST00000548728 219 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AL118558.2-201ENST00000556294 238 ntBASIC2.45□□□□□ -2.02
SOX3P41225 MIR4635-201ENST00000583759 79 ntBASIC2.45□□□□□ -2.02
SOX3P41225 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.45□□□□□ -2.02
SOX3P41225 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SOX3P41225 U2.17-201ENST00000611454 95 ntBASIC2.45□□□□□ -2.02
SOX3P41225 RMST_3.1-201ENST00000611651 109 ntBASIC2.45□□□□□ -2.02
SOX3P41225 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.45□□□□□ -2.02
SOX3P41225 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SOX3P41225 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX3P41225 MAPK10-266ENST00000641066 6555 ntBASIC2.44□□□□□ -2.02
SOX3P41225 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SOX3P41225 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SOX3P41225 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX3P41225 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SOX3P41225 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SOX3P41225 RNU6-1303P-201ENST00000364841 107 ntBASIC2.44□□□□□ -2.02
SOX3P41225 RNU6-898P-201ENST00000365627 104 ntBASIC2.44□□□□□ -2.02
SOX3P41225 MIR10A-201ENST00000385043 110 ntBASIC2.44□□□□□ -2.02
SOX3P41225 RNU6-750P-201ENST00000390946 107 ntBASIC2.44□□□□□ -2.02
SOX3P41225 RNA5SP354-201ENST00000391247 136 ntBASIC2.44□□□□□ -2.02
SOX3P41225 RNU6-373P-201ENST00000411247 98 ntBASIC2.44□□□□□ -2.02
SOX3P41225 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX3P41225 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX3P41225 ERLEC1P1-201ENST00000433806 578 ntBASIC2.44□□□□□ -2.02
SOX3P41225 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX3P41225 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX3P41225 BTF3P15-201ENST00000455606 336 ntBASIC2.44□□□□□ -2.02
SOX3P41225 DYNLL1P5-201ENST00000467158 270 ntBASIC2.44□□□□□ -2.02
SOX3P41225 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.44□□□□□ -2.02
SOX3P41225 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX3P41225 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX3P41225 SNORA25.17-201ENST00000517184 124 ntBASIC2.44□□□□□ -2.02
SOX3P41225 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.44□□□□□ -2.02
SOX3P41225 AC078814.3-201ENST00000553036 491 ntBASIC2.44□□□□□ -2.02
SOX3P41225 AC090115.3-201ENST00000553218 849 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms