Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR186-201ENST00000384988 86 ntBASIC1.66□□□□□ -2.14
RFC3P40938 SNORD56-201ENST00000413522 71 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AL008987.1-201ENST00000415528 237 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AL158823.1-201ENST00000418441 478 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RPS15AP12-201ENST00000419498 388 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 AL606662.1-201ENST00000445763 553 ntBASIC1.66□□□□□ -2.14
RFC3P40938 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 snoU109.1-201ENST00000459339 135 ntBASIC1.66□□□□□ -2.14
RFC3P40938 HMGB1P30-201ENST00000492455 606 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AC112204.1-201ENST00000502591 103 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.66□□□□□ -2.14
RFC3P40938 AC034244.1-201ENST00000507687 207 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RNU6-991P-201ENST00000516168 107 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RNA5SP458-201ENST00000516188 119 ntBASIC1.66□□□□□ -2.14
RFC3P40938 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AP004607.1-201ENST00000524456 203 ntBASIC1.66□□□□□ -2.14
RFC3P40938 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.66□□□□□ -2.14
RFC3P40938 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 AC093249.1-201ENST00000567049 203 ntBASIC1.66□□□□□ -2.14
RFC3P40938 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 MIR4299-201ENST00000577899 72 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AP002360.4-201ENST00000606980 481 ntBASIC1.66□□□□□ -2.14
RFC3P40938 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.66□□□□□ -2.14
RFC3P40938 AC091834.1-201ENST00000614543 472 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AL359547.2-201ENST00000615810 418 ntBASIC1.66□□□□□ -2.14
RFC3P40938 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.66□□□□□ -2.14
RFC3P40938 AP006437.1-201ENST00000641440 3685 ntBASIC1.66□□□□□ -2.14
RFC3P40938 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
RFC3P40938 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
RFC3P40938 AC073343.1-201ENST00000328239 651 ntBASIC1.65□□□□□ -2.15
RFC3P40938 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
RFC3P40938 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.65□□□□□ -2.15
RFC3P40938 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.65□□□□□ -2.15
RFC3P40938 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.65□□□□□ -2.15
RFC3P40938 AC012308.1-201ENST00000451232 178 ntBASIC1.65□□□□□ -2.15
RFC3P40938 MTND2P39-201ENST00000457230 764 ntBASIC1.65□□□□□ -2.15
RFC3P40938 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
RFC3P40938 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
RFC3P40938 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RFC3P40938 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.65□□□□□ -2.15
RFC3P40938 RNU6-311P-201ENST00000516224 102 ntBASIC1.65□□□□□ -2.15
RFC3P40938 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
RFC3P40938 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
RFC3P40938 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
RFC3P40938 AC243960.4-201ENST00000600532 288 ntBASIC1.65□□□□□ -2.15
RFC3P40938 AL138889.2-201ENST00000603883 242 ntBASIC1.65□□□□□ -2.15
RFC3P40938 AC126118.1-201ENST00000607744 628 ntBASIC1.65□□□□□ -2.15
RFC3P40938 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
RFC3P40938 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.65□□□□□ -2.15
RFC3P40938 uc_338.15-201ENST00000615470 191 ntBASIC1.65□□□□□ -2.15
RFC3P40938 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.65□□□□□ -2.15
RFC3P40938 ZNF355P-201ENST00000427301 3216 ntBASIC1.65□□□□□ -2.15
RFC3P40938 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
RFC3P40938 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.65□□□□□ -2.15
RFC3P40938 RNU6-529P-201ENST00000363383 104 ntBASIC1.64□□□□□ -2.15
RFC3P40938 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
RFC3P40938 RNU6-622P-201ENST00000384272 103 ntBASIC1.64□□□□□ -2.15
RFC3P40938 UBE2V1P10-201ENST00000414685 269 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.64□□□□□ -2.15
RFC3P40938 MTCO3P5-201ENST00000433620 714 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.64□□□□□ -2.15
RFC3P40938 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
RFC3P40938 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.64□□□□□ -2.15
RFC3P40938 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.64□□□□□ -2.15
RFC3P40938 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC006512.1-201ENST00000468816 291 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC112206.3-201ENST00000514578 389 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.64□□□□□ -2.15
RFC3P40938 RNA5SP337-201ENST00000517007 109 ntBASIC1.64□□□□□ -2.15
RFC3P40938 RNU6-667P-201ENST00000517186 102 ntBASIC1.64□□□□□ -2.15
RFC3P40938 MTND4LP18-201ENST00000526864 291 ntBASIC1.64□□□□□ -2.15
RFC3P40938 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 AC091489.2-201ENST00000566263 604 ntBASIC1.64□□□□□ -2.15
RFC3P40938 MTCYBP33-201ENST00000575007 1130 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 AC005296.1-201ENST00000616145 209 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AP002782.1-201ENST00000623107 614 ntBASIC1.64□□□□□ -2.15
RFC3P40938 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.64□□□□□ -2.15
RFC3P40938 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.64□□□□□ -2.15
RFC3P40938 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RFC3P40938 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RFC3P40938 SNORD3E-201ENST00000362899 217 ntBASIC1.63□□□□□ -2.15
RFC3P40938 SNORD56.2-201ENST00000363242 71 ntBASIC1.63□□□□□ -2.15
RFC3P40938 SNORD14B-201ENST00000364533 90 ntBASIC1.63□□□□□ -2.15
RFC3P40938 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
RFC3P40938 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
RFC3P40938 RNU2-48P-201ENST00000410694 191 ntBASIC1.63□□□□□ -2.15
RFC3P40938 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
RFC3P40938 HSFY7P-201ENST00000432672 318 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
RFC3P40938 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.63□□□□□ -2.15
RFC3P40938 IFNA20P-201ENST00000436840 528 ntBASIC1.63□□□□□ -2.15
RFC3P40938 HSFY8P-201ENST00000437934 318 ntBASIC1.63□□□□□ -2.15
RFC3P40938 MTND2P29-201ENST00000438595 412 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms