Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC092794.2-201ENST00000620933 563 ntBASIC2.88□□□□□ -1.95
HOXC8P31273 AC011155.2-201ENST00000623202 216 ntBASIC2.88□□□□□ -1.95
HOXC8P31273 AC080100.1-201ENST00000624239 5356 ntBASIC2.88□□□□□ -1.95
HOXC8P31273 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.88□□□□□ -1.95
HOXC8P31273 AL354685.2-201ENST00000448218 1447 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 RNU6-552P-201ENST00000362869 119 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 SNORD115-7-201ENST00000365306 82 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 RNU6-14P-201ENST00000384630 106 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
HOXC8P31273 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC8P31273 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC8P31273 RPL36AP6-201ENST00000435770 321 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 CALM1P1-201ENST00000442082 433 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.87□□□□□ -1.95
HOXC8P31273 MTND3P10-201ENST00000450967 341 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 MTCYBP18-201ENST00000501056 747 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC8P31273 RBBP4P6-201ENST00000508098 202 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AC104806.1-201ENST00000508720 308 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC8P31273 SNORA20.3-201ENST00000516880 132 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC8P31273 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC8P31273 COX6CP5-201ENST00000527162 228 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC8P31273 MIR4703-201ENST00000577728 79 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AL158032.1-201ENST00000605401 106 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC8P31273 Z99571.1-201ENST00000636677 394 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 U2.21-201ENST00000637295 81 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 MTND5P42-201ENST00000637720 498 ntBASIC2.87□□□□□ -1.95
HOXC8P31273 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC8P31273 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC8P31273 SNORD62.1-201ENST00000362541 86 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 Y_RNA.86-201ENST00000363020 111 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HOXC8P31273 RNU6-903P-201ENST00000391270 109 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 RPS4XP7-201ENST00000406274 780 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 RNA5SP508-201ENST00000411327 119 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC8P31273 AC092809.3-201ENST00000415453 231 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC8P31273 SKA2P1-201ENST00000425592 390 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC8P31273 AC011816.1-201ENST00000441346 546 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 OSTCP8-201ENST00000445117 448 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC8P31273 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 RNA5SP24-201ENST00000516478 95 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 SNORD60.2-201ENST00000516883 86 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 SNORA31.18-201ENST00000517043 134 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.86□□□□□ -1.95
HOXC8P31273 GLYCAM1-201ENST00000546596 285 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 MIR4635-201ENST00000583759 79 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AC078899.3-201ENST00000599065 212 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AC022893.3-201ENST00000607665 437 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC8P31273 OR4G1P-203ENST00000641984 1631 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AC010889.1-201ENST00000566193 2666 ntBASIC2.86□□□□□ -1.95
HOXC8P31273 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC8P31273 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
HOXC8P31273 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXC8P31273 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXC8P31273 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 Y_RNA.70-201ENST00000362886 110 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RNU6-1287P-201ENST00000362914 107 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RNU6-1060P-201ENST00000384664 107 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 SNORA3.2-201ENST00000408221 125 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC8P31273 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC8P31273 AL121890.1-201ENST00000435457 205 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AL121601.2-201ENST00000438019 707 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 MTND5P20-201ENST00000448677 143 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RPL23AP70-201ENST00000483361 460 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AC139453.3-201ENST00000493276 369 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AC008628.2-201ENST00000502605 298 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RNU6-507P-201ENST00000516045 100 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 RNU6-123P-201ENST00000516163 102 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 Y_RNA.689-201ENST00000516589 107 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 Y_RNA.702-201ENST00000516843 96 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC8P31273 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC8P31273 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HOXC8P31273 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC8P31273 MIR4782-201ENST00000577987 79 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 BNIP3P10-201ENST00000605360 577 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AC012409.4-201ENST00000612923 249 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AC064859.1-201ENST00000624741 174 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 MIR7515-201ENST00000637837 67 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 AC100810.6-201ENST00000638068 285 ntBASIC2.85□□□□□ -1.95
HOXC8P31273 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC8P31273 MTND5P19-201ENST00000424872 1794 ntBASIC2.84□□□□□ -1.95
HOXC8P31273 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HOXC8P31273 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXC8P31273 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 735.2 ms