Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MTCYBP39-201ENST00000437562 491 ntBASIC1.64□□□□□ -2.15
USF1P22415 Z73417.1-201ENST00000447373 778 ntBASIC1.64□□□□□ -2.15
USF1P22415 MTND2P14-201ENST00000482139 351 ntBASIC1.64□□□□□ -2.15
USF1P22415 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC104564.1-201ENST00000493028 407 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC020699.1-201ENST00000505161 445 ntBASIC1.64□□□□□ -2.15
USF1P22415 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.64□□□□□ -2.15
USF1P22415 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.64□□□□□ -2.15
USF1P22415 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
USF1P22415 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.64□□□□□ -2.15
USF1P22415 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.64□□□□□ -2.15
USF1P22415 AP003461.1-201ENST00000528866 78 ntBASIC1.64□□□□□ -2.15
USF1P22415 ELOCP32-201ENST00000548625 324 ntBASIC1.64□□□□□ -2.15
USF1P22415 IMMP1LP2-201ENST00000552954 492 ntBASIC1.64□□□□□ -2.15
USF1P22415 OR11H5P-201ENST00000554039 926 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.64□□□□□ -2.15
USF1P22415 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
USF1P22415 AL109918.3-201ENST00000603072 338 ntBASIC1.64□□□□□ -2.15
USF1P22415 AL138889.2-201ENST00000603883 242 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
USF1P22415 ELOCP5-201ENST00000604924 333 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC016727.1-205ENST00000605437 569 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC021646.1-201ENST00000605469 484 ntBASIC1.64□□□□□ -2.15
USF1P22415 RNU6-87P-201ENST00000607561 108 ntBASIC1.64□□□□□ -2.15
USF1P22415 AC126118.1-201ENST00000607744 628 ntBASIC1.64□□□□□ -2.15
USF1P22415 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
USF1P22415 uc_338.15-201ENST00000615470 191 ntBASIC1.64□□□□□ -2.15
USF1P22415 U6.42-201ENST00000618440 107 ntBASIC1.64□□□□□ -2.15
USF1P22415 DUXAP9-208ENST00000622815 614 ntBASIC1.64□□□□□ -2.15
USF1P22415 ZNF702P-202ENST00000434269 1966 ntBASIC1.64□□□□□ -2.15
USF1P22415 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
USF1P22415 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USF1P22415 AC103710.2-202ENST00000641454 2853 ntBASIC1.64□□□□□ -2.15
USF1P22415 RNU4-28P-201ENST00000364739 141 ntBASIC1.63□□□□□ -2.15
USF1P22415 MIR186-201ENST00000384988 86 ntBASIC1.63□□□□□ -2.15
USF1P22415 UBE2V1P10-201ENST00000414685 269 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC096920.1-201ENST00000423991 241 ntBASIC1.63□□□□□ -2.15
USF1P22415 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.63□□□□□ -2.15
USF1P22415 AL365184.2-201ENST00000431139 435 ntBASIC1.63□□□□□ -2.15
USF1P22415 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.63□□□□□ -2.15
USF1P22415 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.63□□□□□ -2.15
USF1P22415 AC119618.1-201ENST00000434191 222 ntBASIC1.63□□□□□ -2.15
USF1P22415 AL451074.3-201ENST00000437709 472 ntBASIC1.63□□□□□ -2.15
USF1P22415 DNAJC19P4-201ENST00000440115 345 ntBASIC1.63□□□□□ -2.15
USF1P22415 AL590365.1-201ENST00000450788 243 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.63□□□□□ -2.15
USF1P22415 snoU109.2-201ENST00000459316 135 ntBASIC1.63□□□□□ -2.15
USF1P22415 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.63□□□□□ -2.15
USF1P22415 AP000797.1-201ENST00000478870 387 ntBASIC1.63□□□□□ -2.15
USF1P22415 RPL23AP63-201ENST00000498752 471 ntBASIC1.63□□□□□ -2.15
USF1P22415 HMGB1P35-201ENST00000503360 598 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC112206.3-201ENST00000514578 389 ntBASIC1.63□□□□□ -2.15
USF1P22415 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.63□□□□□ -2.15
USF1P22415 AK6P1-201ENST00000540219 478 ntBASIC1.63□□□□□ -2.15
USF1P22415 ADI1P3-201ENST00000549509 470 ntBASIC1.63□□□□□ -2.15
USF1P22415 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.63□□□□□ -2.15
USF1P22415 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.63□□□□□ -2.15
USF1P22415 AC245884.10-201ENST00000597355 337 ntBASIC1.63□□□□□ -2.15
USF1P22415 SNRPGP17-201ENST00000603780 214 ntBASIC1.63□□□□□ -2.15
USF1P22415 AL158032.1-201ENST00000605401 106 ntBASIC1.63□□□□□ -2.15
USF1P22415 AL031775.1-201ENST00000607014 887 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC104010.1-201ENST00000616889 150 ntBASIC1.63□□□□□ -2.15
USF1P22415 AC022960.3-201ENST00000619794 441 ntBASIC1.63□□□□□ -2.15
USF1P22415 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USF1P22415 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.63□□□□□ -2.15
USF1P22415 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USF1P22415 SNORD3E-201ENST00000362899 217 ntBASIC1.62□□□□□ -2.15
USF1P22415 RNU5F-6P-201ENST00000362979 116 ntBASIC1.62□□□□□ -2.15
USF1P22415 MIR518A2-201ENST00000384966 87 ntBASIC1.62□□□□□ -2.15
USF1P22415 RNA5SP213-201ENST00000391031 106 ntBASIC1.62□□□□□ -2.15
USF1P22415 MRPL42P2-201ENST00000403169 426 ntBASIC1.62□□□□□ -2.15
USF1P22415 Y_RNA.608-201ENST00000410647 95 ntBASIC1.62□□□□□ -2.15
USF1P22415 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 AL137159.1-201ENST00000452808 512 ntBASIC1.62□□□□□ -2.15
USF1P22415 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
USF1P22415 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.62□□□□□ -2.15
USF1P22415 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 AC010587.1-201ENST00000505809 469 ntBASIC1.62□□□□□ -2.15
USF1P22415 MRPS17P9-201ENST00000511924 393 ntBASIC1.62□□□□□ -2.15
USF1P22415 AF131216.2-201ENST00000512316 564 ntBASIC1.62□□□□□ -2.15
USF1P22415 MTND2P32-201ENST00000521584 1038 ntBASIC1.62□□□□□ -2.15
USF1P22415 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.62□□□□□ -2.15
USF1P22415 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.62□□□□□ -2.15
USF1P22415 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.62□□□□□ -2.15
USF1P22415 AC093249.1-201ENST00000567049 203 ntBASIC1.62□□□□□ -2.15
USF1P22415 MIR548AC-201ENST00000585049 88 ntBASIC1.62□□□□□ -2.15
USF1P22415 AC005034.5-201ENST00000604219 466 ntBASIC1.62□□□□□ -2.15
USF1P22415 AC105129.3-201ENST00000605455 485 ntBASIC1.62□□□□□ -2.15
USF1P22415 AC092140.2-201ENST00000618027 521 ntBASIC1.62□□□□□ -2.15
USF1P22415 YWHAEP7-203ENST00000622054 312 ntBASIC1.62□□□□□ -2.15
USF1P22415 AC092192.1-201ENST00000633154 1018 ntBASIC1.62□□□□□ -2.15
USF1P22415 AC007671.2-201ENST00000637344 619 ntBASIC1.62□□□□□ -2.15
USF1P22415 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USF1P22415 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
USF1P22415 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms