Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD8P13378 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD8P13378 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HOXD8P13378 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD8P13378 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.51□□□□□ -1.69
HOXD8P13378 ZNF826P-207ENST00000622273 1910 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 SNORD115-32-201ENST00000364079 82 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 Y_RNA.275-201ENST00000364726 110 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 RNA5SP372-201ENST00000390836 115 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 U3.37-201ENST00000408528 213 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 RNU6ATAC-201ENST00000408749 126 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 CRYBB2P1-203ENST00000415709 538 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AL451074.5-201ENST00000415894 435 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXD8P13378 SNRPEP9-201ENST00000436794 238 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD8P13378 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXD8P13378 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD8P13378 AC073901.1-201ENST00000462471 408 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 SNRPGP7-201ENST00000469016 106 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 RPL29P14-201ENST00000495837 428 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AP004607.1-201ENST00000524456 203 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD8P13378 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD8P13378 MIR3944-201ENST00000581277 108 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AC005255.1-201ENST00000593748 216 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD8P13378 MIR7702-201ENST00000621931 59 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 AC006001.4-201ENST00000622243 395 ntBASIC4.51□□□□□ -1.69
HOXD8P13378 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HOXD8P13378 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD8P13378 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD8P13378 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD8P13378 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD8P13378 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 RNU1-15P-201ENST00000353977 144 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 RNU6-704P-201ENST00000364162 103 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 Y_RNA.233-201ENST00000364407 101 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 RNY1P5-201ENST00000383890 115 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 Y_RNA.418-201ENST00000384029 102 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 RNU6-804P-201ENST00000384286 107 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 RNU6-651P-201ENST00000411040 105 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD8P13378 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD8P13378 snoU13.24-201ENST00000458998 104 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 Y_RNA.638-201ENST00000459374 113 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 AC091959.1-201ENST00000495857 238 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 AC006499.6-201ENST00000511169 607 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 SNORA43.2-201ENST00000516652 128 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 AC100770.1-201ENST00000532310 322 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD8P13378 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD8P13378 MIR4298-201ENST00000584380 73 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 SNRPGP15-201ENST00000600149 222 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 AC090132.2-201ENST00000615881 347 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD8P13378 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD8P13378 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 BX322639.1-202ENST00000423987 2213 ntBASIC4.5□□□□□ -1.69
HOXD8P13378 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXD8P13378 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD8P13378 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD8P13378 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXD8P13378 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXD8P13378 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD8P13378 Y_RNA.383-201ENST00000383855 97 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 RNU6-142P-201ENST00000384019 107 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 SNORA46.1-201ENST00000391069 153 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 RNU1-139P-201ENST00000391307 165 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD8P13378 POLR2KP2-201ENST00000438155 177 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AL353748.1-201ENST00000440753 474 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXD8P13378 AC007395.1-201ENST00000451333 677 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AP001324.2-201ENST00000461163 319 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 RPL21P104-201ENST00000464143 478 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 UBE2CP3-201ENST00000502715 450 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 BTF3L4P4-201ENST00000506381 449 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD8P13378 TRAV28-201ENST00000557548 323 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AC025627.2-201ENST00000576220 160 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXD8P13378 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXD8P13378 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms