Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.91□□□□□ -1.94
PCNAP12004 NDUFA5P4-201ENST00000436704 385 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 MTND3P10-201ENST00000450967 341 ntBASIC2.91□□□□□ -1.94
PCNAP12004 GSTA11P-201ENST00000452866 669 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
PCNAP12004 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCNAP12004 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 RNU6-1332P-201ENST00000516666 104 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 AC243972.3-201ENST00000539655 198 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.91□□□□□ -1.94
PCNAP12004 MIR6134-201ENST00000617606 109 ntBASIC2.91□□□□□ -1.94
PCNAP12004 AL133216.2-202ENST00000634512 349 ntBASIC2.91□□□□□ -1.94
PCNAP12004 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PCNAP12004 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCNAP12004 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCNAP12004 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCNAP12004 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.9□□□□□ -1.94
PCNAP12004 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.9□□□□□ -1.94
PCNAP12004 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCNAP12004 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
PCNAP12004 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.9□□□□□ -1.95
PCNAP12004 SNORD113-7-201ENST00000363762 77 ntBASIC2.9□□□□□ -1.95
PCNAP12004 RNU1-100P-201ENST00000365255 165 ntBASIC2.9□□□□□ -1.95
PCNAP12004 PDCL2P1-201ENST00000419302 352 ntBASIC2.9□□□□□ -1.95
PCNAP12004 TOMM20P4-201ENST00000427861 435 ntBASIC2.9□□□□□ -1.95
PCNAP12004 IFNA20P-201ENST00000436840 528 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC098614.3-201ENST00000438957 440 ntBASIC2.9□□□□□ -1.95
PCNAP12004 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.9□□□□□ -1.95
PCNAP12004 USP9YP8-201ENST00000441913 500 ntBASIC2.9□□□□□ -1.95
PCNAP12004 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.9□□□□□ -1.95
PCNAP12004 AL671855.1-201ENST00000446875 1203 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.9□□□□□ -1.95
PCNAP12004 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.9□□□□□ -1.95
PCNAP12004 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.9□□□□□ -1.95
PCNAP12004 AC006445.1-201ENST00000491925 405 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.9□□□□□ -1.95
PCNAP12004 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
PCNAP12004 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.9□□□□□ -1.95
PCNAP12004 AC022634.1-201ENST00000520765 532 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AP005597.4-201ENST00000526762 229 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.9□□□□□ -1.95
PCNAP12004 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.9□□□□□ -1.95
PCNAP12004 NACAP3-201ENST00000552100 481 ntBASIC2.9□□□□□ -1.95
PCNAP12004 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
PCNAP12004 MIR5004-201ENST00000579078 107 ntBASIC2.9□□□□□ -1.95
PCNAP12004 MIR4742-201ENST00000581069 85 ntBASIC2.9□□□□□ -1.95
PCNAP12004 MIR3944-201ENST00000581277 108 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
PCNAP12004 AL670379.10-201ENST00000604330 253 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AL670379.9-201ENST00000605428 253 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC087045.1-201ENST00000605856 382 ntBASIC2.9□□□□□ -1.95
PCNAP12004 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.9□□□□□ -1.95
PCNAP12004 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
PCNAP12004 AC007318.2-201ENST00000620999 243 ntBASIC2.9□□□□□ -1.95
PCNAP12004 Z69720.2-201ENST00000624755 279 ntBASIC2.9□□□□□ -1.95
PCNAP12004 MIR3199-2-201ENST00000636243 86 ntBASIC2.9□□□□□ -1.95
PCNAP12004 CDC27P3-201ENST00000635418 1910 ntBASIC2.89□□□□□ -1.95
PCNAP12004 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PCNAP12004 SNORD21-201ENST00000383953 95 ntBASIC2.89□□□□□ -1.95
PCNAP12004 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
PCNAP12004 U3.37-201ENST00000408528 213 ntBASIC2.89□□□□□ -1.95
PCNAP12004 Y_RNA.604-201ENST00000410574 102 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.89□□□□□ -1.95
PCNAP12004 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.89□□□□□ -1.95
PCNAP12004 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC091951.2-201ENST00000500762 203 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.89□□□□□ -1.95
PCNAP12004 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.89□□□□□ -1.95
PCNAP12004 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
PCNAP12004 RNU6-1088P-201ENST00000516850 104 ntBASIC2.89□□□□□ -1.95
PCNAP12004 RN7SKP256-201ENST00000517201 314 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC009812.2-201ENST00000517657 457 ntBASIC2.89□□□□□ -1.95
PCNAP12004 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCNAP12004 AC087241.2-201ENST00000535801 324 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.89□□□□□ -1.95
PCNAP12004 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.89□□□□□ -1.95
PCNAP12004 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.89□□□□□ -1.95
PCNAP12004 AC008669.1-201ENST00000565823 2178 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.89□□□□□ -1.95
PCNAP12004 MIR3672-201ENST00000584290 82 ntBASIC2.89□□□□□ -1.95
PCNAP12004 OR1M4P-201ENST00000589199 287 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC008121.1-201ENST00000603244 268 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AL355073.2-201ENST00000612106 557 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC004852.3-201ENST00000614131 326 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC022306.2-201ENST00000617563 647 ntBASIC2.89□□□□□ -1.95
PCNAP12004 AC110079.1-202ENST00000635213 138 ntBASIC2.89□□□□□ -1.95
PCNAP12004 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
PCNAP12004 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCNAP12004 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
PCNAP12004 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PCNAP12004 AC073325.2-201ENST00000339545 159 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-845P-201ENST00000362578 103 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms