Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 FAM157A-202ENST00000615155 405 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AL359314.1-201ENST00000616913 261 ntBASIC3.07□□□□□ -1.92
MMP3P08254 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.07□□□□□ -1.92
MMP3P08254 RMST_7.1-201ENST00000621935 268 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AL031601.2-202ENST00000622650 282 ntBASIC3.07□□□□□ -1.92
MMP3P08254 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.07□□□□□ -1.92
MMP3P08254 AC243829.7-201ENST00000633081 225 ntBASIC3.07□□□□□ -1.92
MMP3P08254 TPTEP1-208ENST00000636884 213 ntBASIC3.07□□□□□ -1.92
MMP3P08254 AC103988.1-201ENST00000566382 2177 ntBASIC3.07□□□□□ -1.92
MMP3P08254 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
MMP3P08254 Y_RNA.263-201ENST00000364659 114 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RNU6-217P-201ENST00000384164 104 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RNU6-510P-201ENST00000391239 108 ntBASIC3.06□□□□□ -1.92
MMP3P08254 EIF4E2P1-201ENST00000393781 255 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RNU2-41P-201ENST00000410991 178 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.06□□□□□ -1.92
MMP3P08254 CYCSP33-201ENST00000414485 327 ntBASIC3.06□□□□□ -1.92
MMP3P08254 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.06□□□□□ -1.92
MMP3P08254 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MMP3P08254 AC099548.1-201ENST00000421443 426 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AL365400.1-201ENST00000431854 640 ntBASIC3.06□□□□□ -1.92
MMP3P08254 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.06□□□□□ -1.92
MMP3P08254 RPS3P1-201ENST00000456781 192 ntBASIC3.06□□□□□ -1.92
MMP3P08254 TRBV12-1-201ENST00000479785 344 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RPS29P20-201ENST00000489592 171 ntBASIC3.06□□□□□ -1.92
MMP3P08254 TRBVA-201ENST00000498804 316 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.06□□□□□ -1.92
MMP3P08254 RNU6-1088P-201ENST00000516850 104 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC105029.1-201ENST00000520250 669 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RNU6-323P-201ENST00000521915 107 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.06□□□□□ -1.92
MMP3P08254 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.06□□□□□ -1.92
MMP3P08254 FAM35CP-201ENST00000554755 2470 ntBASIC3.06□□□□□ -1.92
MMP3P08254 MTCO3P23-201ENST00000561363 289 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC005668.1-201ENST00000571142 476 ntBASIC3.06□□□□□ -1.92
MMP3P08254 RPS3AP23-202ENST00000574601 686 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.06□□□□□ -1.92
MMP3P08254 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.06□□□□□ -1.92
MMP3P08254 AC243960.4-201ENST00000600532 288 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AL670379.10-201ENST00000604330 253 ntBASIC3.06□□□□□ -1.92
MMP3P08254 HSPE1P7-201ENST00000604681 321 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AL670379.9-201ENST00000605428 253 ntBASIC3.06□□□□□ -1.92
MMP3P08254 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.06□□□□□ -1.92
MMP3P08254 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
MMP3P08254 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.06□□□□□ -1.92
MMP3P08254 AC121333.1-201ENST00000567488 2709 ntBASIC3.06□□□□□ -1.92
MMP3P08254 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MMP3P08254 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
MMP3P08254 MTND4P29-201ENST00000503122 1372 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNA5SP432-201ENST00000362480 116 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNU6-797P-201ENST00000363101 109 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AL356057.3-201ENST00000402607 340 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNU2-3P-201ENST00000410144 191 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RN7SKP32-201ENST00000410167 303 ntBASIC3.05□□□□□ -1.92
MMP3P08254 PGBD4P6-201ENST00000421501 610 ntBASIC3.05□□□□□ -1.92
MMP3P08254 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.05□□□□□ -1.92
MMP3P08254 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
MMP3P08254 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.05□□□□□ -1.92
MMP3P08254 MTND1P11-201ENST00000456661 876 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AC003982.1-202ENST00000469928 248 ntBASIC3.05□□□□□ -1.92
MMP3P08254 HMGN2P13-201ENST00000476476 274 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
MMP3P08254 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.05□□□□□ -1.92
MMP3P08254 AC008716.1-201ENST00000511084 513 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNU6-864P-201ENST00000516256 108 ntBASIC3.05□□□□□ -1.92
MMP3P08254 RNU6-572P-201ENST00000516724 80 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
MMP3P08254 AC093027.1-201ENST00000546698 429 ntBASIC3.05□□□□□ -1.92
MMP3P08254 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AC005261.5-201ENST00000596280 355 ntBASIC3.05□□□□□ -1.92
MMP3P08254 AL117336.2-201ENST00000602435 335 ntBASIC3.05□□□□□ -1.92
MMP3P08254 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
MMP3P08254 FTX_3.1-201ENST00000610451 147 ntBASIC3.05□□□□□ -1.92
MMP3P08254 uc_338.5-201ENST00000611839 155 ntBASIC3.05□□□□□ -1.92
MMP3P08254 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
MMP3P08254 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.04□□□□□ -1.92
MMP3P08254 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
MMP3P08254 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MMP3P08254 RNU6-254P-201ENST00000363377 107 ntBASIC3.04□□□□□ -1.92
MMP3P08254 Y_RNA.166-201ENST00000363730 102 ntBASIC3.04□□□□□ -1.92
MMP3P08254 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
MMP3P08254 RNU6-384P-201ENST00000364900 104 ntBASIC3.04□□□□□ -1.92
MMP3P08254 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
MMP3P08254 MIR450B-201ENST00000401182 78 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.04□□□□□ -1.92
MMP3P08254 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.04□□□□□ -1.92
MMP3P08254 AL353621.1-201ENST00000418219 243 ntBASIC3.04□□□□□ -1.92
MMP3P08254 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.04□□□□□ -1.92
MMP3P08254 HMGB1P9-201ENST00000429856 646 ntBASIC3.04□□□□□ -1.92
MMP3P08254 NDUFA5P4-201ENST00000436704 385 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AC125238.1-201ENST00000448842 249 ntBASIC3.04□□□□□ -1.92
MMP3P08254 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.04□□□□□ -1.92
MMP3P08254 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.04□□□□□ -1.92
MMP3P08254 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
MMP3P08254 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.04□□□□□ -1.92
MMP3P08254 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.04□□□□□ -1.92
MMP3P08254 RNU6-1332P-201ENST00000516666 104 ntBASIC3.04□□□□□ -1.92
MMP3P08254 RNU6-1282P-201ENST00000516735 96 ntBASIC3.04□□□□□ -1.92
MMP3P08254 SNORA25.17-201ENST00000517184 124 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms