Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AP000873.1-201ENST00000463987 400 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 S100A11P1-201ENST00000477525 312 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AP000926.1-201ENST00000479573 241 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 SNORA25.10-201ENST00000515926 124 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 SNORA70.16-201ENST00000516390 95 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC009902.1-201ENST00000519351 183 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 MIR3149-201ENST00000584629 83 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC006006.1-201ENST00000603082 144 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC090425.1-201ENST00000610007 140 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DOAP06340 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DOAP06340 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DOAP06340 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 RNU6-1167P-201ENST00000363227 94 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 SNORA80A-201ENST00000363922 136 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 RNU6-450P-201ENST00000364654 107 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 RNU6-1329P-201ENST00000365664 107 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 RNU6-1179P-201ENST00000384667 107 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 RPL27AP8-201ENST00000424277 446 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC007919.1-201ENST00000429380 217 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 SNRPEP4-201ENST00000435815 279 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 RNU7-138P-201ENST00000459479 64 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC018437.1-201ENST00000492214 406 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AL359273.1-201ENST00000510918 627 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 NDUFB9P3-201ENST00000521269 501 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC011602.1-201ENST00000546484 331 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 HMGB1P14-201ENST00000557424 591 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 MIR548AC-201ENST00000585049 88 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 VN1R107P-201ENST00000601784 209 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 MIR7106-201ENST00000612419 65 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DOAP06340 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC010733.2-201ENST00000589496 5702 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 AC091812.1-201ENST00000432235 1948 ntBASIC3.62□□□□□ -1.83
HLA-DOAP06340 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DOAP06340 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DOAP06340 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DOAP06340 Y_RNA.47-201ENST00000362697 108 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 Y_RNA.153-201ENST00000363615 91 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 RNU6-607P-201ENST00000411283 108 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 USMG5P1-201ENST00000425964 177 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 RPL23AP50-201ENST00000434149 455 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 HMGB1P12-201ENST00000438594 598 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DOAP06340 RPS24P13-201ENST00000442520 397 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 AC025750.2-201ENST00000442609 450 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DOAP06340 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DOAP06340 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DOAP06340 MTCO2P24-201ENST00000515611 426 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DOAP06340 AL161798.1-201ENST00000604630 131 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 AC018889.1-201ENST00000605372 397 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 AC138305.3-201ENST00000624988 240 ntBASIC3.61□□□□□ -1.83
HLA-DOAP06340 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DOAP06340 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DOAP06340 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 Y_RNA.512-201ENST00000384518 102 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AL445529.1-201ENST00000398713 389 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AL138878.1-201ENST00000405131 347 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 RNA5SP31-201ENST00000411144 127 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 Z85995.1-201ENST00000415547 335 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 BX276092.3-201ENST00000424182 230 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC096644.2-201ENST00000429278 159 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
HLA-DOAP06340 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DOAP06340 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms