Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL117342.1-201ENST00000404861 406 ntBASIC0.57□□□□□ -2.32
APOC1P02654 SRIP3-201ENST00000413200 219 ntBASIC0.57□□□□□ -2.32
APOC1P02654 TMSB4XP6-201ENST00000415187 135 ntBASIC0.57□□□□□ -2.32
APOC1P02654 TMSB4XP1-201ENST00000424567 135 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.57□□□□□ -2.32
APOC1P02654 MTND1P18-201ENST00000448191 573 ntBASIC0.57□□□□□ -2.32
APOC1P02654 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.57□□□□□ -2.32
APOC1P02654 RPL26P26-201ENST00000480251 434 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AC023194.1-201ENST00000493084 308 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.57□□□□□ -2.32
APOC1P02654 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.57□□□□□ -2.32
APOC1P02654 AC008015.1-201ENST00000555505 465 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.57□□□□□ -2.32
APOC1P02654 AP003465.2-201ENST00000602571 373 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AL590240.4-201ENST00000616908 390 ntBASIC0.57□□□□□ -2.32
APOC1P02654 AC253576.2-201ENST00000618815 580 ntBASIC0.57□□□□□ -2.32
APOC1P02654 RNA5SP493-201ENST00000364115 91 ntBASIC0.56□□□□□ -2.32
APOC1P02654 RNU6-1065P-201ENST00000384513 106 ntBASIC0.56□□□□□ -2.32
APOC1P02654 MIR548B-201ENST00000385247 97 ntBASIC0.56□□□□□ -2.32
APOC1P02654 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.56□□□□□ -2.32
APOC1P02654 AL035666.1-201ENST00000446195 348 ntBASIC0.56□□□□□ -2.32
APOC1P02654 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.56□□□□□ -2.32
APOC1P02654 AC093259.1-201ENST00000509755 300 ntBASIC0.56□□□□□ -2.32
APOC1P02654 RNU2-53P-201ENST00000516257 147 ntBASIC0.56□□□□□ -2.32
APOC1P02654 AC109329.1-201ENST00000518744 317 ntBASIC0.56□□□□□ -2.32
APOC1P02654 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.56□□□□□ -2.32
APOC1P02654 AC022616.8-201ENST00000533569 253 ntBASIC0.56□□□□□ -2.32
APOC1P02654 MRPS36P5-201ENST00000551909 298 ntBASIC0.56□□□□□ -2.32
APOC1P02654 MTCO2P2-201ENST00000591258 225 ntBASIC0.56□□□□□ -2.32
APOC1P02654 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
APOC1P02654 U6.99-201ENST00000637524 83 ntBASIC0.56□□□□□ -2.32
APOC1P02654 AC018630.2-201ENST00000534866 2403 ntBASIC0.56□□□□□ -2.32
APOC1P02654 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.55□□□□□ -2.32
APOC1P02654 RNU6-23P-201ENST00000363283 107 ntBASIC0.55□□□□□ -2.32
APOC1P02654 MIR186-201ENST00000384988 86 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AL590084.2-201ENST00000401481 382 ntBASIC0.55□□□□□ -2.32
APOC1P02654 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
APOC1P02654 FTH1P15-201ENST00000406984 280 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.55□□□□□ -2.32
APOC1P02654 AC027644.1-201ENST00000419595 298 ntBASIC0.55□□□□□ -2.32
APOC1P02654 MTCO2P5-201ENST00000422621 426 ntBASIC0.55□□□□□ -2.32
APOC1P02654 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.55□□□□□ -2.32
APOC1P02654 TRIM60P13-201ENST00000432350 1283 ntBASIC0.55□□□□□ -2.32
APOC1P02654 MTCO3P5-201ENST00000433620 714 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.55□□□□□ -2.32
APOC1P02654 JTBP1-201ENST00000441314 247 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.55□□□□□ -2.32
APOC1P02654 snoU13.8-201ENST00000458890 104 ntBASIC0.55□□□□□ -2.32
APOC1P02654 RAP1BP2-201ENST00000478270 544 ntBASIC0.55□□□□□ -2.32
APOC1P02654 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.55□□□□□ -2.32
APOC1P02654 RNU6-390P-201ENST00000516259 103 ntBASIC0.55□□□□□ -2.32
APOC1P02654 RNU6-197P-201ENST00000516680 100 ntBASIC0.55□□□□□ -2.32
APOC1P02654 RNU6-1261P-201ENST00000517194 104 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.55□□□□□ -2.32
APOC1P02654 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.55□□□□□ -2.32
APOC1P02654 AC044913.1-201ENST00000557200 430 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.55□□□□□ -2.32
APOC1P02654 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
APOC1P02654 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
APOC1P02654 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.55□□□□□ -2.32
APOC1P02654 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.55□□□□□ -2.32
APOC1P02654 MIR1248-201ENST00000629190 106 ntBASIC0.55□□□□□ -2.32
APOC1P02654 OR4G3P-201ENST00000633500 913 ntBASIC0.55□□□□□ -2.32
APOC1P02654 MIR6767-201ENST00000637302 66 ntBASIC0.55□□□□□ -2.32
APOC1P02654 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.55□□□□□ -2.32
APOC1P02654 AC100821.1-201ENST00000523153 2479 ntBASIC0.55□□□□□ -2.32
APOC1P02654 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
APOC1P02654 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
APOC1P02654 Y_RNA.40-201ENST00000362645 93 ntBASIC0.54□□□□□ -2.32
APOC1P02654 RNU6-1300P-201ENST00000391046 108 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.54□□□□□ -2.32
APOC1P02654 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.54□□□□□ -2.32
APOC1P02654 MTCO3P45-201ENST00000443036 613 ntBASIC0.54□□□□□ -2.32
APOC1P02654 KATNBL1P3-201ENST00000443475 909 ntBASIC0.54□□□□□ -2.32
APOC1P02654 MTND5P8-201ENST00000449817 1083 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC130509.1-201ENST00000464158 433 ntBASIC0.54□□□□□ -2.32
APOC1P02654 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.54□□□□□ -2.32
APOC1P02654 AC010631.1-201ENST00000474150 156 ntBASIC0.54□□□□□ -2.32
APOC1P02654 HMGN2P9-201ENST00000476875 229 ntBASIC0.54□□□□□ -2.32
APOC1P02654 RPS27P22-201ENST00000478056 241 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AL163195.1-201ENST00000496941 348 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.54□□□□□ -2.32
APOC1P02654 AC034244.1-201ENST00000507687 207 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC009902.1-201ENST00000519351 183 ntBASIC0.54□□□□□ -2.32
APOC1P02654 CYCSP23-201ENST00000519781 313 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.54□□□□□ -2.32
APOC1P02654 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.54□□□□□ -2.32
APOC1P02654 AC073410.2-201ENST00000603240 332 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC093788.1-201ENST00000609356 927 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC084824.5-201ENST00000612009 413 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC040896.1-201ENST00000613819 479 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC010975.3-201ENST00000618727 978 ntBASIC0.54□□□□□ -2.32
APOC1P02654 AC099654.9-201ENST00000637055 678 ntBASIC0.54□□□□□ -2.32
APOC1P02654 MTND5P35-201ENST00000557537 1720 ntBASIC0.54□□□□□ -2.32
APOC1P02654 FARSBP1-201ENST00000435808 1778 ntBASIC0.53□□□□□ -2.32
APOC1P02654 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
APOC1P02654 RNU1-93P-201ENST00000364704 169 ntBASIC0.53□□□□□ -2.32
APOC1P02654 RNU6-1207P-201ENST00000384343 107 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms